Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 659 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score = 97.8 bits (242), Expect = 7e-25
 Identities = 69/214 (32%), Positives = 105/214 (49%), Gaps = 17/214 (7%)

Query: 39  NEAMQQQSRQNTDLYSDVIACQNQGGEMLNAVRDGIASSAEILTEEKESLSELDKIFDQT 98
           NE M+QQS + T               M  AV +  A+S  I    +++        +QT
Sbjct: 406 NEGMEQQSGEITS--------------MAGAVEEFSATSLNIADNMRDTQRVARANAEQT 451

Query: 99  RVAIVNLGNRATYINKQATS---SMQAVTELNSTTSSINQFVAAIQGISEQTNLLALNAA 155
            V    +   +  + + AT+   + + V  L+  +  I   V  I  I+EQTNLLALNAA
Sbjct: 452 SVGRTAMDEASDALAQIATALSGTARVVGSLDQRSQEIGSIVGVITAIAEQTNLLALNAA 511

Query: 156 IEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASNIKEIVHNNQNSAL 215
           IEAARAGE GRGFAVVADEVR LAS+  EA+ +I  ++ QI  +  N    +   Q    
Sbjct: 512 IEAARAGEQGRGFAVVADEVRSLASRTREATDRITGMISQIQAETGNAMSTMELGQRLMD 571

Query: 216 DVASSSTQIGQVVEDVLQRSNNMQQVIHNAATAS 249
           D    + ++   +  + ++S +  +     +TA+
Sbjct: 572 DGLERNAKVAAALALIDEQSRSADEQFSAISTAT 605