Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 97.4 bits (241), Expect = 7e-25
 Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 16/227 (7%)

Query: 27  VEIEELKNMARENEA-----MQQQSRQNTDLYSDVIACQNQGGEMLNAVRDGIASSAEIL 81
           ++I E   M+ +N A     +  Q+R+   L + +        E+ +  +    ++    
Sbjct: 247 IQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQAASDATVHAK 306

Query: 82  TEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSSMQAVTELNSTTSSINQFVAAIQ 141
              ++ +  +++  D        +G  A+    Q  ++   + +L+S ++ I Q +  IQ
Sbjct: 307 NAARDGMHAVEQTVDA-------IGEMAS----QMKTASSVIEQLSSQSAMIGQVMEVIQ 355

Query: 142 GISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQAS 201
            I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA ++ E++ +I++++  I T   
Sbjct: 356 SIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTSTR 415

Query: 202 NIKEIVHNNQNSALDVASSSTQIGQVVEDVLQRSNNMQQVIHNAATA 248
           N  E +      ++    ++   G  +  +L + +++       ATA
Sbjct: 416 NAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATA 462