Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 15/143 (10%)

Query: 96  DQTRVAIVNLGNRATYINKQATSSMQAVTELNSTTSSINQFVAAIQGISEQTNLLALNAA 155
           D  R+A   +GN           S+Q + +L   +  +++ V  I GI++QTNLLALNAA
Sbjct: 284 DSVRLAEKMVGN--------IEQSLQQIEQLVVLSKDVSEIVKTISGIADQTNLLALNAA 335

Query: 156 IEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQ-------IVTQASNIKEIVH 208
           IEAARAGE GRGFAVVADEVRQLAS+  +A+ +I ++V +       + +  S + +I +
Sbjct: 336 IEAARAGEQGRGFAVVADEVRQLASRTSKATEEINQVVNKNLSLTEAVTSSISQVSQIAN 395

Query: 209 NNQNSALDVASSSTQIGQVVEDV 231
                 ++V++   QI Q  E+V
Sbjct: 396 ETNGRIVEVSTIMEQIYQGAENV 418