Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (255), Expect = 2e-26
 Identities = 73/281 (25%), Positives = 138/281 (49%), Gaps = 18/281 (6%)

Query: 33  KNMARENEAMQQQSRQNTDLYSDVIACQNQGGEMLNAVRDGIASSAEILTEEKESLSELD 92
           + +  E  AM Q++ Q   L S+    Q +  E +      + ++A+ ++    + ++  
Sbjct: 283 QQVVEETNAMSQRATQVDHLASN----QREETEQVATAMTEMTTTAQEISNNANNAAQSA 338

Query: 93  KIFDQTRVAIVNLGNRATY----INKQATSSMQAVTELNSTTSSINQFVAAIQGISEQTN 148
           K  +     + N+ N A      + ++   +   + +L    ++I   +A IQ I+EQTN
Sbjct: 339 KDAEDNATDVHNIVNAAARSVQALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTN 398

Query: 149 LLALNAAIEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVKQIVTQASNIKEIVH 208
           LLALNAAIEAARAGE GRGFAVVADEVR+LAS+  E++ QI  +++Q+   +    + + 
Sbjct: 399 LLALNAAIEAARAGEQGRGFAVVADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAME 458

Query: 209 NNQNSALDV---ASSSTQIGQVVEDVLQRSNNMQQVIHNAATASFLNTTKLDHAVWKSNV 265
           ++Q  ++     A+++ +  Q ++  +    +M  +I  A     +   ++   +     
Sbjct: 459 SSQQRSITTVREANAAAEALQKIQASIGTIMDMNALIATATEEQSIVGQEISQRI----- 513

Query: 266 YQLIEKNQHSHGVNSHTECRLGQWYFKGFGAENYQHLSNFK 306
             ++  +Q S   +   + R G     G   E Y+ ++ FK
Sbjct: 514 --VVISDQSSESADLANQNRQGSQTLNGRAHELYELVARFK 552