Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  106 bits (264), Expect = 1e-27
 Identities = 75/228 (32%), Positives = 123/228 (53%), Gaps = 42/228 (18%)

Query: 75  ASSAEILTEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSSMQAVTELNSTTSSIN 134
           A +A  LTE     ++  + F ++ ++      + + ++K  +SS QAV ++     +I+
Sbjct: 211 AQNASSLTENASQQAQTGQQFVKSTIS------KMSELSKDISSSAQAVNQVEERVVAIS 264

Query: 135 QFVAAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLASKAHEASSQIEKLVK 194
             V  I+ ISEQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA +   A+ +I++++ 
Sbjct: 265 SVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMIS 324

Query: 195 QI--------------VTQASNIKEIVHNNQNSALD---------------VASSSTQIG 225
           Q+              V QA++  E++  N  S LD               +A+++ Q  
Sbjct: 325 QLQSSANSAVNLMEKSVVQAADGVELI-TNAGSELDGIVNQVQLLNDMNFQIAAAAGQQS 383

Query: 226 QVVEDVLQRSNNMQQVIHNAAT--ASFLNTTKLDHAVWKSNVYQLIEK 271
            V E++ +  NN+++++  + T     L T++    + +SN  +L  K
Sbjct: 384 NVAEEMNENLNNVRELVEGSVTVMTELLETSE----IMQSNAEELDRK 427