Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  101 bits (252), Expect = 4e-26
 Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 19/250 (7%)

Query: 4   NSRLKAENEALKQKLLEQQRRYEVEIEELKNMARENEAMQQQSRQNTDLYSDV----IAC 59
           N+ + A ++AL + +       E  I    +    ++A+  Q  Q + L + +       
Sbjct: 248 NNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATV 307

Query: 60  QNQGGEMLNAVRDGIASSAEILTEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSS 119
            +  G   +  RD + +S E    +K+  S +D I    R   V LG     +NK     
Sbjct: 308 ADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSI----RALSVELGVATDQVNKLKEGV 363

Query: 120 MQAVTELNSTTSSINQFVAAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLA 179
           MQ           I++  + I GISEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA
Sbjct: 364 MQ-----------ISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLA 412

Query: 180 SKAHEASSQIEKLVKQIVTQASNIKEIVHNNQNSALDVASSSTQIGQVVEDVLQRSNNMQ 239
           S+ H ++ +I+ ++ ++   A +    +  +Q  A +  +++   G  +  ++    ++ 
Sbjct: 413 SRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVS 472

Query: 240 QVIHNAATAS 249
                 ATA+
Sbjct: 473 DKATQIATAA 482