Pairwise Alignments

Query, 362 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 362 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  571 bits (1471), Expect = e-167
 Identities = 286/362 (79%), Positives = 326/362 (90%)

Query: 1   MWFNSRLKAENEALKQKLLEQQRRYEVEIEELKNMARENEAMQQQSRQNTDLYSDVIACQ 60
           MWFN++LK+EN ALKQ+L++ Q++++ E++ELK +  E+E M+QQSRQ  DL+++VIACQ
Sbjct: 1   MWFNAQLKSENNALKQQLIQLQQQHQQELDELKTIIHEHETMKQQSRQAADLFTEVIACQ 60

Query: 61  NQGGEMLNAVRDGIASSAEILTEEKESLSELDKIFDQTRVAIVNLGNRATYINKQATSSM 120
           NQGGEMLNA+RDG+A SA  LTEEK+SLSELD IFDQTR+AI NLG RA  IN QA+ SM
Sbjct: 61  NQGGEMLNAIRDGLAGSATQLTEEKDSLSELDAIFDQTRLAIANLGQRAHEINTQASQSM 120

Query: 121 QAVTELNSTTSSINQFVAAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS 180
           +AVT LN TT+SINQFV+AIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS
Sbjct: 121 EAVTALNGTTASINQFVSAIQGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRQLAS 180

Query: 181 KAHEASSQIEKLVKQIVTQASNIKEIVHNNQNSALDVASSSTQIGQVVEDVLQRSNNMQQ 240
           KAHEASSQIEKLVKQIVTQAS IK IVH NQ+SA D+A+SSTQIG VVEDVLQRS+ MQQ
Sbjct: 181 KAHEASSQIEKLVKQIVTQASEIKNIVHTNQSSASDIAASSTQIGHVVEDVLQRSHKMQQ 240

Query: 241 VIHNAATASFLNTTKLDHAVWKSNVYQLIEKNQHSHGVNSHTECRLGQWYFKGFGAENYQ 300
           VIHNAAT SFLNTTKLDHAVWKSNVYQLIEK +H H VNSHTECRLGQWYFKGFGAENYQ
Sbjct: 241 VIHNAATTSFLNTTKLDHAVWKSNVYQLIEKPKHDHSVNSHTECRLGQWYFKGFGAENYQ 300

Query: 301 HLSNFKALDAPHKAVHDAGKAALAAKQKGNLPEMVKQLRLMEDSSMRVVNCLDNLLRDVY 360
           HLSNFKALD PHKAVHDAGKAALAA+QKGNL +MVKQL +MED+SMRVV C+D+L+ DVY
Sbjct: 301 HLSNFKALDTPHKAVHDAGKAALAARQKGNLSDMVKQLHVMEDASMRVVQCIDHLMHDVY 360

Query: 361 RQ 362
           ++
Sbjct: 361 QR 362