Pairwise Alignments

Query, 1074 a.a., carbamoyl-phosphate synthase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 447 a.a., acetyl-CoA carboxylase biotin carboxylase subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 74.3 bits (181), Expect = 2e-17
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 55/247 (22%)

Query: 652 ALEAAGVPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPL 711
           A++ AGVP +  S   +D  E + +                           A+RIGYP+
Sbjct: 122 AMKKAGVPCVPGSDGPLDNDEAKNKAH-------------------------AKRIGYPV 156

Query: 712 VVRPSYVLGGRAMEIVYDQQDLLRYFN----EAVSVSNASPVLLDHFLDDAIEVDIDAVC 767
           +++ S   GGR M +V ++ +L +       EA +  N   V ++ FL++   V++  + 
Sbjct: 157 IIKASGGGGGRGMRVVRNEAELTKSIQMTRAEAKAAFNNDMVYMEKFLENPRHVEVQVIA 216

Query: 768 DGETVVIGAIMEHIEQAGVHSGDSGCSL-----------PPYTLSQEIQDRMRVQVGKLA 816
           DG+   I            H  +  CS+           P   +++E++  +  +  +  
Sbjct: 217 DGQGNAI------------HLAERDCSMQRRHQKVVEEAPAPGITEEMRKFIGERCTRAC 264

Query: 817 MELGVVGLMNVQFAVKNNEIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQ 876
           +E+G  G    +F  +N E Y IE+N R     P     TGV L K   R+ AGQ L   
Sbjct: 265 IEIGYRGAGTFEFLYENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPL--- 321

Query: 877 NFTQEVI 883
           +F QE I
Sbjct: 322 SFKQEDI 328



 Score = 47.0 bits (110), Expect = 3e-09
 Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 116 IGATADAIDKAEDRSRFDKAMKSIGLEC-PRAGIAHSMEEAYGVL--EQVGFPCIIRPSF 172
           +G  A+ I    D+     AMK  G+ C P +      +EA      +++G+P II+ S 
Sbjct: 103 VGPRAETIRLMGDKVSAINAMKKAGVPCVPGSDGPLDNDEAKNKAHAKRIGYPVIIKAS- 161

Query: 173 TMGGSGGGIAYNKEEFEEICSQGLDLSPTKE------LLIDESLIGWKEYEMEVVRDRND 226
             GG G G+   + E E   S  +  +  K       + +++ L   +  E++V+ D   
Sbjct: 162 -GGGGGRGMRVVRNEAELTKSIQMTRAEAKAAFNNDMVYMEKFLENPRHVEVQVIADGQG 220

Query: 227 NCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQF 286
           N I +   E    M       +  APA  +T++  + +         EIG    G+   F
Sbjct: 221 NAIHLA--ERDCSMQRRHQKVVEEAPAPGITEEMRKFIGERCTRACIEIGYRGAGT---F 275

Query: 287 GINPKDGRMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDI 339
               ++G    IEMN R+     +    TG  + K   ++A G  L     DI
Sbjct: 276 EFLYENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSFKQEDI 328