Pairwise Alignments

Query, 1074 a.a., carbamoyl-phosphate synthase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 501 a.a., acetyl-CoA carboxylase biotin carboxylase subunit from Methanococcus maripaludis S2

 Score = 85.1 bits (209), Expect = 1e-20
 Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 41/328 (12%)

Query: 582 VHAALALREDGYETIMVNCNPETVSTDYDTSDRLY--FEPVTLEDVLEIVRIEK---PKG 636
           V    A +E G +T+ V    +  S   + +D  Y   EP   +  L + RI K     G
Sbjct: 15  VRVIRACKELGIKTVAVFSEADEHSLYRNIADECYPIGEPPASKSYLNMERILKVAEKAG 74

Query: 637 VIVQYGG----QTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQAIQR--LEMKQPE 690
           V   + G       +K A      G+  IG   +AID    +   ++A++   + +    
Sbjct: 75  VDAVHPGYGFLSENVKFADECHKRGIEFIGPPTNAIDVMGSKINAKKAMKTAGVPVLPGR 134

Query: 691 NDTVTTVEGAVIAAERIGYPLVVRPSYVLGGRAMEIVYDQQDLLRYFNEAVSVSNA---- 746
            +++ + E A+  A+ IGYP++++ S   GG  M +VY++++L+       S++ +    
Sbjct: 135 EESIESEEEAIEVADEIGYPVIIKASAGGGGIGMNVVYNKEELVDTIQSTKSIAQSAFGD 194

Query: 747 SPVLLDHFLDDAIEVDIDAVCDGETVVIGAIMEHIEQAGVHSGDSGCSL----------- 795
           S V ++ +L+    ++I  V D    VI            H GD  CS+           
Sbjct: 195 STVFIEKYLEKPRHIEIQVVADKFGNVI------------HLGDRECSIQRRHQKLIEES 242

Query: 796 PPYTLSQEIQDRMRVQVGKLAMELGVVGLMNVQFAVKNNEIYMIEVNPRAARTVPFVSKA 855
           P   +++E+++RM     K A  +    +  V+F     E Y +E+N R     P     
Sbjct: 243 PSPIMTEELRERMGNAAVKAAKAINYHSVGTVEFLYSKGEFYFLEMNTRVQVEHPITEVV 302

Query: 856 TGVPLAKIAARVMAGQSLKAQNFTQEVI 883
           TGV + K   ++ AG+ L   ++TQ+ I
Sbjct: 303 TGVDIVKEQIKIAAGKKL---SYTQDEI 327



 Score = 80.9 bits (198), Expect = 2e-19
 Identities = 91/352 (25%), Positives = 148/352 (42%), Gaps = 45/352 (12%)

Query: 8   KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYI- 66
           K +LI   G I +           +  +A +E G + + V S          +AD  Y  
Sbjct: 3   KKVLIANRGEIAV-----------RVIRACKELGIKTVAVFSEADEHSLYRNIADECYPI 51

Query: 67  -EP------IQWEVVRNIIAKERPDAILPTMGGQTA-LNCALELEAKGVLAEFNVEMIGA 118
            EP      +  E +  +  K   DA+ P  G  +  +  A E   +G+      E IG 
Sbjct: 52  GEPPASKSYLNMERILKVAEKAGVDAVHPGYGFLSENVKFADECHKRGI------EFIGP 105

Query: 119 TADAIDKAEDRSRFDKAMKSIGLEC--PRAGIAHSMEEAYGVLEQVGFPCIIRPSFTMGG 176
             +AID    +    KAMK+ G+     R     S EEA  V +++G+P II+ S   GG
Sbjct: 106 PTNAIDVMGSKINAKKAMKTAGVPVLPGREESIESEEEAIEVADEIGYPVIIKASAGGGG 165

Query: 177 SGGGIAYNKEEFEEICSQGLDLSPT----KELLIDESLIGWKEYEMEVVRDRNDNCIIV- 231
            G  + YNKEE  +       ++ +      + I++ L   +  E++VV D+  N I + 
Sbjct: 166 IGMNVVYNKEELVDTIQSTKSIAQSAFGDSTVFIEKYLEKPRHIEIQVVADKFGNVIHLG 225

Query: 232 ---CSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGI 288
              CSI+            I  +P+  +T++  + M NA++   + I   + G+ V+F  
Sbjct: 226 DRECSIQR------RHQKLIEESPSPIMTEELRERMGNAAVKAAKAINYHSVGT-VEFLY 278

Query: 289 NPKDGRMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDIT 340
           +   G    +EMN RV     +    TG  I K   K+A G  L    ++IT
Sbjct: 279 S--KGEFYFLEMNTRVQVEHPITEVVTGVDIVKEQIKIAAGKKLSYTQDEIT 328