Pairwise Alignments

Query, 357 a.a., DNA-damage-inducible protein P (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 355 a.a., DNA polymerase IV (RefSeq) from Shewanella amazonensis SB2B

 Score =  483 bits (1242), Expect = e-141
 Identities = 248/355 (69%), Positives = 284/355 (80%)

Query: 1   MRKIIHVDMDCYFAAVEMRDFPEYRGKPLAVGGSRERRGVISTCNYEARRFGVRSAMATA 60
           MRKIIH+DMDCYFAAVEMRDFP+YRGKPLAVGGS +RRGVISTCNYEAR FGVRSAMA+A
Sbjct: 1   MRKIIHIDMDCYFAAVEMRDFPQYRGKPLAVGGSSDRRGVISTCNYEARAFGVRSAMASA 60

Query: 61  YAQKLCPDLILVPGRMQVYKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSDCKLHKGSAT 120
           YA KLCP+LILVPGRM+VYK VS QIR IFSRYT LIEPLSLDEAYLDVSDC L++GSAT
Sbjct: 61  YALKLCPNLILVPGRMEVYKAVSQQIREIFSRYTSLIEPLSLDEAYLDVSDCSLYQGSAT 120

Query: 121 LIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSLRQ 180
            IAEAIR DI  ETGLTASAGV+P+KF+AKVASDLNKPNGQYV+ PD +  F+R LSL +
Sbjct: 121 RIAEAIRSDIFKETGLTASAGVSPIKFVAKVASDLNKPNGQYVVSPDTLMHFVRALSLGK 180

Query: 181 IPGVGKVTAEKLSSLGLNTCGDVQTYPKQELITRFGKFGAVLIERAQGIDDRGLSVSRER 240
           IPGVGKVT EKL++LGL TC DVQ  P+  L   FGKFGAVL ERA G D+R +   RER
Sbjct: 181 IPGVGKVTEEKLNALGLKTCADVQQVPQTLLTEHFGKFGAVLYERAHGRDERAIVSHRER 240

Query: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSTRLSRSAKDRQIHKQVVKLKFSDFKQTTI 300
           KSVGVETTL +D++T E C  V+  LI EL+ RL RSA  R+IHK VVKLKF DF+QTTI
Sbjct: 241 KSVGVETTLPKDLHTREACLDVLSSLIPELNRRLGRSASGRRIHKLVVKLKFDDFRQTTI 300

Query: 301 EHRSNDVSVMMFYELLAQAIARQDGRGIRLLGVAVGLSDKSLISEVDPLQTQLVL 355
           E R+ + SV +F  LL+QA  R +GRGIRL+G+A GL  +S   +    Q  L L
Sbjct: 301 ESRAEEPSVRLFESLLSQAFVRAEGRGIRLVGIAAGLVCRSEAEQEGSAQLALSL 355