Pairwise Alignments

Query, 357 a.a., DNA-damage-inducible protein P (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 357 a.a., DNA polymerase IV from Ralstonia sp. UNC404CL21Col

 Score =  342 bits (878), Expect = 7e-99
 Identities = 182/352 (51%), Positives = 239/352 (67%), Gaps = 1/352 (0%)

Query: 1   MRKIIHVDMDCYFAAVEMRDFPEYRGKPLAVGGSRERRGVISTCNYEARRFGVRSAMATA 60
           MRKIIH D DC++AA+EMRD P   GKPLAVGG  ERRGV++TCNYEAR+FG+ SAM  A
Sbjct: 1   MRKIIHCDCDCFYAAIEMRDDPRLVGKPLAVGGRPERRGVVATCNYEARKFGIHSAMPMA 60

Query: 61  YAQKLCPDLILVPGRMQVYKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSDCKLHKGSAT 120
            A K CPDL++VP  M+ Y+ V+ QI AI+  YT L+EPLSLDEAYLDV+D  +  GS T
Sbjct: 61  QAVKRCPDLLIVPPSMEKYRQVARQIFAIYHSYTPLVEPLSLDEAYLDVTDSPMLAGSGT 120

Query: 121 LIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSLRQ 180
            IAE IRR +  E G+T SAGVAP KF+AK+ASD NKP+G +V+ P++V  F+  L + +
Sbjct: 121 RIAEDIRRRVREEIGITVSAGVAPNKFIAKIASDWNKPDGLFVVRPEQVDAFVAELPVDR 180

Query: 181 IPGVGKVTAEKLSSLGLNTCGDVQTYPKQELITRFGKFGAVLIERAQGIDDRGLSVSRER 240
           + GVGKVTA KL  LG  TCGD++ +    L   FG FG  L +  +GID R +  S+ R
Sbjct: 181 LFGVGKVTAAKLRRLGAETCGDLRAWGTDRLQQHFGVFGFRLHDLCRGIDHRQVQPSQIR 240

Query: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSTRLSRSAKDRQIHKQVVKLKFSDFKQTTI 300
           KSV VE T A D+ TLE CQ+ +  L+++L+ R+ R+     IHK  VKL+F+DF+ TT+
Sbjct: 241 KSVSVEETYATDLRTLEDCQRELIVLVEQLAARVERARAGNMIHKTYVKLRFADFRGTTV 300

Query: 301 EHRSNDVSVMMFYELLAQAIARQDGRGIRLLGVAVGLSDKSLISEVDPLQTQ 352
           E  S  VS+ +F +LL Q   R+ G  +RLLGV V L +    +   PL T+
Sbjct: 301 ECISPQVSLPVFSKLLTQGFERR-GIPVRLLGVGVRLYESDAHARQQPLFTE 351