Pairwise Alignments

Query, 357 a.a., DNA-damage-inducible protein P (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella sp. ANA-3

 Score =  597 bits (1539), Expect = e-175
 Identities = 300/339 (88%), Positives = 324/339 (95%)

Query: 1   MRKIIHVDMDCYFAAVEMRDFPEYRGKPLAVGGSRERRGVISTCNYEARRFGVRSAMATA 60
           MRKIIH+DMDCYFAAVEMRDFPEYRGKPLAVGGSR +RGVISTCNYEAR+FGVRSAMAT 
Sbjct: 1   MRKIIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSRVQRGVISTCNYEARKFGVRSAMATG 60

Query: 61  YAQKLCPDLILVPGRMQVYKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSDCKLHKGSAT 120
           YA KLCPDLILVPGRMQVYK+VS QIRAIF RYTELIEPLSLDEAYLDVSDCKL KGSAT
Sbjct: 61  YALKLCPDLILVPGRMQVYKEVSQQIRAIFCRYTELIEPLSLDEAYLDVSDCKLFKGSAT 120

Query: 121 LIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSLRQ 180
           LIAEAIRRDILAETGLTASAGVAP+KFLAKVASDLNKPNGQ VIPPD+V EF+++LSLR+
Sbjct: 121 LIAEAIRRDILAETGLTASAGVAPIKFLAKVASDLNKPNGQCVIPPDEVAEFVKSLSLRK 180

Query: 181 IPGVGKVTAEKLSSLGLNTCGDVQTYPKQELITRFGKFGAVLIERAQGIDDRGLSVSRER 240
           IPGVGKVTAEKLSSLGLNTC DVQ YPKQELI RFGKFG VL+ERA GID+RG+SVSRER
Sbjct: 181 IPGVGKVTAEKLSSLGLNTCADVQAYPKQELIARFGKFGTVLVERAHGIDERGISVSRER 240

Query: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSTRLSRSAKDRQIHKQVVKLKFSDFKQTTI 300
           KSVGVETTLAQDIYTLEQCQQVMPGLIQELS+RL RSAK RQIHKQVVKLKF+DFKQTTI
Sbjct: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSSRLGRSAKGRQIHKQVVKLKFNDFKQTTI 300

Query: 301 EHRSNDVSVMMFYELLAQAIARQDGRGIRLLGVAVGLSD 339
           EHRS++VSV+MFYELL+QA+ARQ+GRGIRLLGV+VGL++
Sbjct: 301 EHRSDEVSVVMFYELLSQAMARQEGRGIRLLGVSVGLAE 339