Pairwise Alignments

Query, 418 a.a., NADH:ubiquinone oxidoreductase, Na translocating, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., hydrogenase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 14/189 (7%)

Query: 231 FGIIMLNVRIATPPPRNLTLP-----CGKMSSYIWSLKAGDKVTISGPFGEFFAKDT--D 283
           FG+      I +PP R   L       G++++ +  LK GDKV +  P G +F  +    
Sbjct: 71  FGVGESTFVINSPPTRMDYLQFSIMRAGEVTAALHGLKPGDKVGVRAPLGNWFPFEDMRG 130

Query: 284 AEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNF 343
            ++VF+GGG GMAP+R+ +   L        ++  YGAR+  +M + +D       +D  
Sbjct: 131 KDIVFVGGGIGMAPLRTLLLYMLDNRADYGNITLLYGARTPGDMAFRDDVQDWLGRSD-- 188

Query: 344 VWHVALSDPQPEDNWDGYTGFIHNVLYENYLKNHDAPEDCEFYMCGPPMMNAAVIGMLKN 403
             +  L+  Q  D+W    G I +VL +    N ++       +CGPP+M    +  LK 
Sbjct: 189 -MNTTLTVDQAPDDWPHRAGLIPHVLLDLAPSNANSVA----VLCGPPIMIKFTVEALKK 243

Query: 404 LGVEDENIL 412
           L   DE I+
Sbjct: 244 LHFADEQII 252