Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 202 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit from Pseudomonas stutzeri RCH2

 Score =  312 bits (800), Expect = 2e-90
 Identities = 154/202 (76%), Positives = 176/202 (87%)

Query: 1   MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY 60
           MEHY+SL +R+VFIENMALAFFLGMCTF+A+SKKV TA+GLGIAV+VV  I+VPAN +IY
Sbjct: 1   MEHYLSLFVRAVFIENMALAFFLGMCTFIAISKKVETAIGLGIAVIVVQAITVPANNLIY 60

Query: 61  QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120
             LL  GALAWAG PE DLSFL  +++IGVIAA+VQILEM LDKY P LYNALG+FLPLI
Sbjct: 61  TYLLKSGALAWAGLPEVDLSFLGLLSYIGVIAAIVQILEMTLDKYVPSLYNALGVFLPLI 120

Query: 121 TVNCAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGL 180
           TVNCAI G   FMVERDY LGES+V+G GSG+ WALAI L+AGIREKLKY+DVP+GL+GL
Sbjct: 121 TVNCAIMGGTLFMVERDYNLGESVVYGVGSGLSWALAIALLAGIREKLKYSDVPDGLQGL 180

Query: 181 GITFITAGLMALGFMSFSGVSL 202
           GITFIT GLM+LGFMSFSGV L
Sbjct: 181 GITFITIGLMSLGFMSFSGVQL 202