Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., electron transport complex subunit E from Vibrio cholerae E7946 ATCC 55056

 Score = 79.0 bits (193), Expect = 6e-20
 Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 16/161 (9%)

Query: 6   SLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIYQGLLA 65
           +L++  ++  N AL   LG+C  LAVS  VT A+GLGIA ++VL   V +N  +      
Sbjct: 6   TLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVL---VGSNVTV------ 56

Query: 66  PGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLITVNCA 125
             +L     P+     ++   F+ +IA+LV  +++ ++ Y   LY +LGIF+PLI  NC 
Sbjct: 57  --SLVRDYVPKE----VRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCI 110

Query: 126 IFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIRE 166
           I G       ++  L  +L  GF  G+G    +V++  +RE
Sbjct: 111 IIGRAEAFASKNDVLPAAL-DGFWMGLGMTSVLVVLGSLRE 150