Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 202 a.a., Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) from Shewanella loihica PV-4

 Score =  307 bits (786), Expect = 1e-88
 Identities = 148/202 (73%), Positives = 179/202 (88%)

Query: 1   MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY 60
           MEHYI+L +++VFI+NMAL+FF+GMCTFLAVSKKV+T+ GLGIAV+VV+T++VP NQ+IY
Sbjct: 1   MEHYINLFVQAVFIDNMALSFFMGMCTFLAVSKKVSTSFGLGIAVIVVMTLAVPLNQLIY 60

Query: 61  QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120
             +LAPGALAWAG PE DLS+LK ITFIGVIAALVQILEM LDKY P LY++LGIFLPL+
Sbjct: 61  SKVLAPGALAWAGYPELDLSYLKLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLL 120

Query: 121 TVNCAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGL 180
           TVNCAIF  V FM  RDY LGES+VF  GSG+GWA+AIVL+AG+RE++K+  +P GL+G+
Sbjct: 121 TVNCAIFAGVIFMANRDYTLGESVVFATGSGLGWAMAIVLLAGLRERMKFHAIPAGLQGV 180

Query: 181 GITFITAGLMALGFMSFSGVSL 202
           GITFIT GLMALGFMSFSG+SL
Sbjct: 181 GITFITTGLMALGFMSFSGISL 202