Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 212 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Klebsiella michiganensis M5al

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 16/166 (9%)

Query: 1   MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY 60
           M+    +L+  +   N      LG+C+ LAV+ K+ TA  + IAV +V   S     +I 
Sbjct: 7   MKEMKRVLVGPLIANNPITLQVLGVCSALAVTTKLETAFVMTIAVTLVTAFSSMFISMIR 66

Query: 61  QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120
             +  P +             ++ I  + +IA+LV +++  L  +       L +F+ LI
Sbjct: 67  HHI--PNS-------------VRIIVQMAIIASLVIVVDQLLRAFAYETSKQLSVFVGLI 111

Query: 121 TVNCAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIRE 166
             NC + G       +   L  S + G G+G+G+   ++L+  +RE
Sbjct: 112 ITNCIVMGRAEAYAMKSPPLA-SFMDGIGNGLGYGAILLLVGFLRE 156