Pairwise Alignments

Query, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 232 a.a., electron transport complex RsxE subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 16/168 (9%)

Query: 1   MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY 60
           M +Y  +  + ++  N  L   LG+C  LAV+  +T A+GLG+A ++VL   + +N ++ 
Sbjct: 1   MTNYREIAWQGLWKNNPGLVQLLGLCPLLAVTATLTNALGLGVATMLVL---IGSNILV- 56

Query: 61  QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120
                  +L     P+     ++   F+ +IAALV  +++ ++ Y   LY +LGIFLPLI
Sbjct: 57  -------SLVRDYVPKE----IRIPVFVMIIAALVTAVQLLINAYAYGLYLSLGIFLPLI 105

Query: 121 TVNCAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIREKL 168
             NC I G       R+     +   G   G+G+ L + ++   RE L
Sbjct: 106 VTNCIIIGRAEAFASRNNAFSAAF-DGLMMGLGFTLVLAVLGATREIL 152