Pairwise Alignments

Query, 262 a.a., NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 254 a.a., Na(+)-translocating NADH-quinone reductase subunit C (RefSeq) from Shewanella amazonensis SB2B

 Score =  181 bits (460), Expect = 1e-50
 Identities = 95/261 (36%), Positives = 150/261 (57%), Gaps = 7/261 (2%)

Query: 1   MASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKA 60
           MA NKDS   T+   V LCL+C+  ++  A +L+  +   K  +  + +L AA + D   
Sbjct: 1   MAFNKDSVLGTMTFTVVLCLVCSFMITGTADVLKERKLVKKRNELMQNVLIAADIKDV-- 58

Query: 61  GKVTKAQILETYGKHIEAKLVNLKTGDWVEGVDANTFDQRKAARDVKTSFVPENDIASVK 120
                + +  T+   +   +VNL TG+  E  +   +D+R AA + +TS     D A +K
Sbjct: 59  -----SDVKATFEARVRPVMVNLATGELHERDNILDYDERMAAINPETSSKIAKDTARIK 113

Query: 121 RVSEDAVVYLVRDDQGKLTSVILPVHGYGLWSTMYAFLALDADLNTIQSLVYYEHGETPG 180
             + +  ++ V DD+G+L +++LPV+G GLWS +Y F+ + AD NTI   V+YEHGETPG
Sbjct: 114 TRANEIRIFKVLDDKGELQALVLPVYGKGLWSIIYGFVGVKADFNTITGAVFYEHGETPG 173

Query: 181 LGGEVQNAQWKAKWHGKKLFDAQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSL 240
           +G  + +  W AKW GK++F+A+G++A  + K  A A     VD +SGAT T  GV  ++
Sbjct: 174 IGDFINHDDWLAKWQGKQIFNAKGDVAFKIVKGEAKAGDLSAVDGVSGATRTGAGVAKAV 233

Query: 241 TFWLGKEGFASFIEKARNGGL 261
            FW G EGF + + K +  G+
Sbjct: 234 QFWFGPEGFEAALGKLKAAGV 254