Pairwise Alignments

Query, 262 a.a., NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 264 a.a., Na(+)-translocating NADH-quinone reductase subunit C (RefSeq) from Shewanella sp. ANA-3

 Score =  198 bits (503), Expect = 1e-55
 Identities = 100/257 (38%), Positives = 155/257 (60%), Gaps = 5/257 (1%)

Query: 1   MASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKA 60
           M   KD+   T+   + LCL+C+  ++  A +L+  +   K  + Q+Y+L AA   D   
Sbjct: 1   MVFKKDTVVGTMIFTITLCLLCSFMITGTAGVLKERKLAKKRDELQRYVLMAA---DVNI 57

Query: 61  GKVTKAQILETYGKHIEAKLVNLKTGDWVEGVDANTFDQRKAARDVKTSFVPENDIASVK 120
           G+  + +  + + K ++  L+NL TG      +   FD+R AA + +TS  P+ DIA +K
Sbjct: 58  GQGNEFR--DIFAKSVKPLLINLDTGKVDSDANVLDFDERMAAINPETSSAPKKDIAKIK 115

Query: 121 RVSEDAVVYLVRDDQGKLTSVILPVHGYGLWSTMYAFLALDADLNTIQSLVYYEHGETPG 180
             + DA V+ V DD GKL+SV++P +G GLWS +Y ++A++ D NTI+ +V YEHGETPG
Sbjct: 116 TRANDARVFKVFDDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFNTIKGMVVYEHGETPG 175

Query: 181 LGGEVQNAQWKAKWHGKKLFDAQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSL 240
           +G  V +  W + W GK+LFD +G  A+ + K  A     +GVDA+SGAT+T  GVQ ++
Sbjct: 176 IGDFVTDPHWLSLWKGKQLFDEKGKFAMRLVKGGAKEGDVHGVDAVSGATMTGRGVQRAM 235

Query: 241 TFWLGKEGFASFIEKAR 257
            FW G EGF +F  + +
Sbjct: 236 EFWFGVEGFQTFFNQLK 252