Pairwise Alignments

Query, 683 a.a., TonB-dependent receptor C-terminal region domain lipoprotein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 601 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  126 bits (316), Expect = 3e-33
 Identities = 122/512 (23%), Positives = 210/512 (41%), Gaps = 81/512 (15%)

Query: 173 FAANYIK-EQGDAIFFNGSDADRKKMDMLFKVNASSLLGARSPQQTEFTYQFIDDDSYRS 231
           FA ++++ E+GD  +    D +     +   + ASSL GAR  Q+TE ++ + D  S   
Sbjct: 166 FAGSHLRREEGDDWWVQTKDTE-----VFVALGASSLPGARKKQRTELSWLYKDATS--- 217

Query: 232 LLGITAADWQQDPLLLYSATAQDKHQGRQHKYQLSHQVNLGDSKVMSDFYYQFYSQRLDQ 291
              + A+DW Q              Q  + + QLSH V  G+S+      +         
Sbjct: 218 --ALPASDWIQ--------------QSDRQRLQLSHSVQTGESRRTDTRLFY-------- 253

Query: 292 LGAFNGQNIGLGT-LYDIAAFDRNPSANGADVNMLVQDNDYSAFGAQTQSINQYGEHQIT 350
                 Q  G  T L D+      P    A+ +  + D+ +  +G  ++S++++G H I 
Sbjct: 254 ------QETGFRTFLADMTMMPTPPILPVAEHSGKLGDSQFHTYGIVSESLDKFGSHSIG 307

Query: 351 YSARYHTDKAEMRFGDQTALWQADRSIVRDESNAVLAYTDDATALTSAIDSLWRWQGMQI 410
           Y   Y  + AE    D+                      D A+ L   +     +  + +
Sbjct: 308 YRLAYQREGAEYLLADKHI-------------------NDSASVLDLGVRGRLGFDWVDV 348

Query: 411 KLGLTYEHVSVNREVSLAFAGLDEADFSDSDWMPQLGVLYDAGDWRFSTDIRRAWAAASA 470
           ++   +    + R+ S A       DF   DW   +G L+ A D R        +A  S 
Sbjct: 349 EVDGLWRRADLTRDTSEA-----GTDFRVDDWQYGVG-LWFAND-RIMLRGEHRFAPPSP 401

Query: 471 GNLTQDAQESLHYQVSAQYASDGIKADLRAYVQEFDNLHVDCDSYSMCVDSRLLTQENIP 530
           GNL   +Q + H +++A++    +      + Q FDNLH DC   S C   R ++Q N  
Sbjct: 402 GNLEALSQSADHLRLTARWPLGDLMLQGEVWYQAFDNLHFDCTELSDCETIRGVSQLNAG 461

Query: 531 DVLTYGVEFGLGYRSMLGELELPLELSYQYLSAEYQTSTCTD-IQGCVLEGDKLAWLPEH 589
           +V   G+  GL +    G +++PL +  +   A + +S C +    C  +GD++ W P+ 
Sbjct: 462 EVDAEGLSLGLQWSGQFGMVKVPLSIQLEENRANFASSACLEQYSVCWQDGDRVPWQPQR 521

Query: 590 QLQLSAGIEYAQYQLNLVAAYQSERDFSQYGSELQRVDGQWRADIAANYDIDKHHRVYFR 649
           Q+ L+ G+   ++ L++       RD       L+R+D        A       H+VY R
Sbjct: 522 QVTLAMGLAAGEWSLSVTG-----RDSEFVDENLRRIDVSLSWQRGA-------HQVYLR 569

Query: 650 LENLFDESLVTTVSNSGIRTENGRISYLGYQW 681
            +N+  E L        I  E   +  LGY+W
Sbjct: 570 GDNVSAEPLSNPTDFGPISGE--VLVSLGYRW 599