Pairwise Alignments

Query, 683 a.a., TonB-dependent receptor C-terminal region domain lipoprotein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 737 a.a., putative TonB-dependent receptor protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  211 bits (536), Expect = 1e-58
 Identities = 174/692 (25%), Positives = 317/692 (45%), Gaps = 38/692 (5%)

Query: 21  NSLNANPLYSQTLDLAKLNDQYHSTDDAMQLSNLNSLTLLRADHSGNSANISMRSATQG- 79
           N +N  P  +  L   +L D +  +D    L+++  + +   +  G   N+ MR   Q  
Sbjct: 55  NPINTVPGSAHQLSQEEL-DTFKYSDIMRTLASVPGVYIQEEEGYGLRPNLGMRGTGQNR 113

Query: 80  ---VAVMQDRVYFSPAPYSAPQLQLLPHL-LLQQSVTTTPLANMAVGGQGSFGVVDYQSL 135
              + VM+D V  +PAPY++P     P    +QQ       + +  G + + GVV+  S 
Sbjct: 114 SEKITVMEDGVLAAPAPYASPAAYYFPTSGRMQQIEVLKGSSTVKYGPRTTGGVVNMVSR 173

Query: 136 NIIERSQSGSVQIEGTTDSDVNAGMRWGVNQKEYGALFAANYIKEQGDA-IFFNGSDADR 194
            I +   +G++ +    D         G   +  GA+      +  G   I   G D   
Sbjct: 174 QIPDAELAGALDVALGQDGYGKLHAHAGGQGERIGAVTEVYRYQADGFRDINGVGGDTGF 233

Query: 195 KKMDMLFKVNASSLLGARSPQQTEFTYQFIDDDSYRSLLGITAADWQQDPLLLYSATAQD 254
            K D+L KV   S   A+  Q+ E   ++ D+ S  + +G+T  D+   P   YSA+ +D
Sbjct: 234 VKNDLLAKVAIDSAKDAKYAQRLELKLKYADEVSDETYMGLTDEDYAAKPFSRYSASQKD 293

Query: 255 KHQGRQHKYQLSHQVNLGDS-KVMSDFYYQFYSQRLDQLGAFNGQNIGLGTLYDIAAFDR 313
           +      + QL H ++   +  + +  YY  +++   +    +G+++  G +   + FD 
Sbjct: 294 EMTTEHKQLQLIHIIDFSSTVSLATTAYYNDFARNWYKADKVDGKSLSKGGIEAASVFDA 353

Query: 314 NPSANGADVNMLVQDNDYSAFGAQTQSINQYGEHQITYSARYHTDKAEMRF--------- 364
           NP     DV++   +  Y + G QT+     G+HQ+    R H D+ + RF         
Sbjct: 354 NPEG-AIDVSVKANNRVYISQGIQTELGLLLGDHQLDIGVRLHQDEMD-RFQWADTYSLD 411

Query: 365 -GDQTALWQADRSIVRDESNAVLAYTDDATALTSAIDSLWRWQGMQIKLGLTYEHVSVNR 423
              Q +L +A   +   +SN +    D A AL++ +   +      +  G+ YE V+V R
Sbjct: 412 ANQQMSLTKA--GVPGTDSNRI----DSAEALSAYVQDRFTLGAFTLTAGVRYEDVTVER 465

Query: 424 EV-SLAFAGLD-EADFSDSDW---MPQLGVLYDAGDWRFS-TDIRRAWAAASAGNLTQDA 477
           E    A  G + +  F ++ +   +P L   +   D       +++ +A A+ GN     
Sbjct: 466 EDWGKANPGRNGDGAFKENSFSALLPSLSATWQLTDSTLLLAGVQKGFAPAAPGNTNGQE 525

Query: 478 QESLHYQVSAQYASDGIKADLRAYVQEFDNLHVDCDSYSMCVDSRLLTQENIPDVLTYGV 537
           +ES +Y+   ++ +    A+  A+  ++ N+H +C +   C + +L  Q N  +V+  G+
Sbjct: 526 EESWNYEAGTRFVNGNFNAEAIAFYGDYSNMHGNCTAAQGCDEDKLDNQYNAGEVVVKGL 585

Query: 538 EFGLGYR-SMLGELELPLELSYQYLSAEYQTSTCTDIQ--GCVLEGDKLAWLPEHQLQLS 594
           E   GY+ +  G L  P++L+Y Y S E+Q S  ++ +  G V  GD+ ++ P+HQL LS
Sbjct: 586 ELSAGYQFNTDGALSFPVKLAYTYTSTEFQNSFESEFETWGSVQVGDEFSYTPKHQLYLS 645

Query: 595 AGIEYAQYQLNLVAAYQSERDFSQYGSELQRVD---GQWRADIAANYDIDKHHRVYFRLE 651
           AGI   Q+QL L   Y S+   +    ++   D    +   D++  Y IDK   VY  ++
Sbjct: 646 AGISVEQWQLTLAGRYTSDMRATAGQGDIAADDLIAAKTLVDLSGRYFIDKQQEVYLTVD 705

Query: 652 NLFDESLVTTVSNSGIRTENGRISYLGYQWRF 683
           NL DE+ +TT ++  + +   R   +GY ++F
Sbjct: 706 NLLDETYMTTRAHGSVFSGKPRSITVGYSYKF 737