Pairwise Alignments

Query, 377 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 353 a.a., 16S rRNA m(2)G 1207 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 26/189 (13%)

Query: 199 PEFNLTISNLSNVFAANKLDIGARIMLDNLPQGKFNTVVDLGCGNGVLGLRAAQLYPNAD 258
           P+ N+TI NL  VF+   LD G  ++L +LP      V+D GCG GV+     +  P   
Sbjct: 180 PQGNITICNLVGVFSEKHLDQGTELLLSHLPTLS-GRVLDFGCGAGVIAAALLKAQPTLS 238

Query: 259 IHFIDDSEMAVASAKANWTMNQ----------LAEGKGHFHWDDCMTHLPEDIEPDLVLC 308
           +  ID + MA+AS +     N           LA+  G F               D ++ 
Sbjct: 239 LECIDINAMALASCELTLAANGMTAKVYPSDGLAQTSGKF---------------DGIIS 283

Query: 309 NPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRLFKNCTTVASNG 368
           NPPFH G A T  IA +   D+ ++L++ GI  IV NRHL Y   +   F   T  A N 
Sbjct: 284 NPPFHDGLASTTSIAQRFVADSAKQLQSKGIWQIVTNRHLPYSDTIAAEFGQLTVPAENN 343

Query: 369 KFVILQAQK 377
           K+ +   Q+
Sbjct: 344 KYKLYSFQQ 352