Pairwise Alignments

Query, 445 a.a., Na+/H+ antiporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 6/218 (2%)

Query: 13  PASFVALLPLFVFL---SLFIGAGVYFQSQGVDFAFYQLPSVIAIMPAIILALVLSKQKL 69
           P   + L  +F F+    LF G G+      +D ++      +  +   ++  ++SK   
Sbjct: 277 PLVVLILAIIFAFMISGGLFAGVGIIESFLSMDASWGLFWGGLVTLLFTVIYFIVSKAVP 336

Query: 70  NHAIDTFIGGIGHSNIIAMCLIYLLAGGFAAVAKATGGVDATVALGLSLIPSNLLLPGFF 129
              I       G   ++    I +LA    +V    G      +L  + +P  +L    F
Sbjct: 337 AKDIANLFAK-GSKLMLPAITILILAWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILF 395

Query: 130 VIAAFIATAMGTSMGTIAAVAPIALGVADQAQIDYALM--AGAVMSGALFGDNLSIISDT 187
           +++ F+A + GTS GT   + PIA+ +A    +   ++    AV+ GA++GD+ S ISDT
Sbjct: 396 LLSGFMAFSTGTSWGTFGIMLPIAVPMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPISDT 455

Query: 188 TIAATRTQGCDMKDKFRENLIFAIPASLLTFVAFVIAG 225
           TI ++   G    D  +  L +     ++ F+ ++I G
Sbjct: 456 TIMSSTGAGTKHIDHVQTQLPYTTLIGIMAFLGYLIVG 493