Pairwise Alignments

Query, 871 a.a., extracellular nuclease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 944 a.a., lamin tail domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score = 62.0 bits (149), Expect = 2e-13
 Identities = 149/670 (22%), Positives = 249/670 (37%), Gaps = 98/670 (14%)

Query: 195 IYQVQGAGESSPYVPAGAFESESEVTVRGVVTARGENLFKGFYLQ--EVKGDNSPYTSDG 252
           I+Q+QG  ++SP +       +S  T   +VTA G     GF +Q  + + D  P TS+G
Sbjct: 317 IWQIQGREQTSPLL------GKSVTTTGNIVTAVGP---AGFTMQTPDSRADADPLTSNG 367

Query: 253 VFVFLGEAPPPAIQPGVEICVQGKVKEYFGLTQIDIKTDKKFEAGTK--------GEVPV 304
           V+VF    P  AI  G  + V  KV  Y+ LT++   T      G             P 
Sbjct: 368 VYVFTSAKPTVAI--GDVVDVAAKVDNYYHLTELKNATVTVTAHGATLPKAVVFGARTPS 425

Query: 305 AAPFYVAEGETLAQALERFEGMNVLLDAGSDLKINRTFSYDYAGKRNNMLVSYKAPLMKP 364
           + P  ++ G T  Q    F GM V+++ G     N+ FS +   +  ++  + K  L +P
Sbjct: 426 SDPNKLSCGATNFQC---FVGMRVVIENGMINTGNKRFSTEPFAE-VSITANGKRSLRQP 481

Query: 365 TQLYPALSAEATALAKSNRENQLF-IESDYKPADGIIPYFPDFNAETGYIRVGDQLTNLQ 423
              +         L   +   ++F + +D     G +P    F A T +          +
Sbjct: 482 GVRFSVPVPAGVDLPNWSGNPEVFKMNTD---DFGAVPINTPFVAGTTF--------RAE 530

Query: 424 GVVGYSYGAYRLVATNTITAGDFIRGDDRTDAPSVATKGDIRVASFNVLNFFNDVVGGDT 483
           G++ Y +GAY  + T      D  R               +R+ +FN+  F +       
Sbjct: 531 GIISYDFGAYTFIPTRI----DVKRAAPMPRPVLPTPPFALRIGAFNMERFCDSEFNTTF 586

Query: 484 NPSGGNRGALTEEEMLLQRTKIVSAITAMNADIVGLMEIANNGFGEKSAIKNLVDALNEK 543
             SG ++    ++  L  R      ++A    ++ L ++ +        +K+L       
Sbjct: 587 TCSGDSKEPTPDQVALKTR-----RLSAYVGSVLKLPDVLST-----EEVKSLAVLQGLA 636

Query: 544 QTTENAYSYIQIADTDKYDGKYF-GSD--AITVGMLYRAGKVSLAGAARTIETPEQHASV 600
           +   + Y         KYD     G D   I VG L RA +     + R +   E     
Sbjct: 637 KQLGDDYPV-------KYDAYLLPGHDPSGINVGFLVRADRGVRVLSVRQLGADETWDDN 689

Query: 601 GSVTRIKDGKTETNPGNDAYQRHSLAQTFKIHDQNLTVVVNHLKSKNSGCLEDWVNFEES 660
           GS   + D                L  T ++      V+  H K++ +      V+ + +
Sbjct: 690 GSTAFVHD-------------HPPLLLTAEVRGMRFHVISVHPKARTN------VDKDNA 730

Query: 661 VDPADLQGRCNEFRVSAAKVLGE-ALKDVKGDLLVIGDMNAYGMEDP-LRVLTDFDASKS 718
               D   R  +  VS AK + E   +     LLV+GD NAY   D  + V+        
Sbjct: 731 TAVRDRLKRFTQ-SVSLAKQVQELQTRYPSQPLLVVGDFNAYQFSDGWVDVVGMISGKYK 789

Query: 719 DRD---------IMTASWTTLNG-KVYERQGSKIDKGYGLINLNTKAHGTGTYSYSYNGE 768
           D +         +  A W  +      +R      + +G I   T+A G+G  S      
Sbjct: 790 DSENLLKLGQNIVHPALWNAVESVPENDRYSFLFTENFGEIQGYTQA-GSGN-SGREVPT 847

Query: 769 LGNLDHALANTSLAKRLVDIEDWHINSVESSLFEFGKKFSGNLVKSENAFSASDHDPVIV 828
           +  LDHAL N + + R + ++    +    +  E     + N      A  ASDHD  ++
Sbjct: 848 VQVLDHALLNRAASFRFLHMQYGRADLDAPAQTEAD---AANAADWTKAIGASDHDGFVL 904

Query: 829 ALSYPAPVVP 838
            L  PA   P
Sbjct: 905 DLFAPAMFDP 914



 Score = 44.7 bits (104), Expect = 3e-08
 Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 38/203 (18%)

Query: 7   LTAVSLAVAAALPMMANANVMITEY-VEGSS--NNKAIELYNSGNTAIDLTGYKLVRYKD 63
           L A  L +A+     A A++ I+++ V G S  N++ +EL+N+G T +DL+GYK      
Sbjct: 10  LWAALLGIASIASAQA-ADLSISQFRVRGPSGGNDEFVELFNAGTTTLDLSGYKFNASNA 68

Query: 64  GATDAADMQVLDGQSIAPKATKVILNS---------SGVITLPQGVDSFSGTLSFNGG-- 112
             T    +    G SIAP    ++ NS         +G +    GV    G    + G  
Sbjct: 69  SGTTGTRLTFPSGTSIAPGCHLLLTNSASGGYSGSVAGDLKYSTGVTDDGGLALLDAGGQ 128

Query: 113 --DAVAL-----VKDGAVVDIIGDVPTPVGWGLDVTLKRKLDSLVANTVFNPAQWEQLPK 165
             D V L      K G  +  +G      G+G     K     L  NT  N A +  +  
Sbjct: 129 PVDQVGLSAGSAYKAGTPLTSLGSTNADKGYG----RKTNGAGLPQNTGDNQADFVVV-- 182

Query: 166 DTFTGLGSLDTPTKPETPAFSCS 188
                     TPT P   A +C+
Sbjct: 183 ----------TPTAPHNAASACA 195