Pairwise Alignments

Query, 871 a.a., extracellular nuclease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 818 a.a., ExeM/NucH family extracellular endonuclease from Ralstonia sp. UNC404CL21Col

 Score =  305 bits (781), Expect = 7e-87
 Identities = 286/901 (31%), Positives = 413/901 (45%), Gaps = 147/901 (16%)

Query: 17  ALPMMANANVMITEYVEGSSNNKAIELYNSGNTAIDLTGYKLVRYKDGATDAADMQVLDG 76
           ALP  A+A ++I+EYVEGSSNNKAIE+YN      DL  YK+ +Y +GA+       L G
Sbjct: 14  ALP--AHAELLISEYVEGSSNNKAIEIYNPDGIEADLGVYKIEQYNNGASTPTASFSLSG 71

Query: 77  QSIAPKATKVILNSSGVITLPQGVDSFSGTLSFNGGDAVALVKDGAVVDIIGDV---PTP 133
           + +AP A  V+ +S+    L   V+  +   SFNG +A+ L + G VVD IG V   P  
Sbjct: 72  K-LAPGAVHVMAHSTLASALGTRVNQ-TAAFSFNGDNALTLTRSGVVVDRIGQVGYQPPS 129

Query: 134 VGWGL------DVTLKRK----LDSLVANTVFNPA-QWEQLPKDTFTGLGSLDTPTKPET 182
             WG       D TL+RK    +        F+P+ QW+    D F+ LG  +       
Sbjct: 130 GFWGTASDGTKDHTLRRKGTVKMGDANITAAFDPSPQWDAFNIDDFSDLGLYNGQGTVTP 189

Query: 183 P-AFSCSGAKIVPIYQVQGAGESSPYVPAGAFESESEVTVRGVVTA--RGENLFKGFYLQ 239
           P A +  GA    +  VQGAG +SP        +   V +  VVTA   G N F GF++Q
Sbjct: 190 PLATAVCGAPATHLADVQGAGATSPL-------AGQNVEIEAVVTADYSGTNGFNGFFVQ 242

Query: 240 EVKGDNS--PYTSDGVFVFLGEAPPPAIQPGVEICVQGKVKEYFGLTQIDIKTDKKFEAG 297
           +        P  S+G+FV+   AP  + + G  + + GKV+E +G TQ+ + T+      
Sbjct: 243 QPDAQRRRLPGVSEGLFVY---APGVSARAGDLVHLVGKVEEKYGQTQLTLATNGIASCA 299

Query: 298 TKGEV-PVAAPFYVAEGETLAQALERFEGMNVLLDAGSDLKINRTFSYDYAGKRNNMLVS 356
           +   V PV     VA+    A+AL  +EGM V L     L ++ T+     G+  ++L+S
Sbjct: 300 SGHSVTPVDVTLPVAD----AKALAAYEGMLVRLP--QTLTVSETYEL---GRYGSVLLS 350

Query: 357 YKAPLMKPTQLYPALSAEATALAKSNRENQLFIESDYKPAD-GIIPYFPDFNAETGYIRV 415
               L  PT + P  +  A A A +N  N++ ++      + G + Y     +    +R 
Sbjct: 351 -NGRLPLPTNVAPPANG-AAAQAAANALNRIVLDDGSNQQNPGTVRYPAPGLSAANPVRA 408

Query: 416 GDQLTNLQGVVGYSYGAYRLVATNTITAGDF-IRGDDRTDAPSVATKGDIRVASFNVLNF 474
           G  ++ +QGV+   Y A+RL       A  F    + R  AP+   + D+RVASFNVLN+
Sbjct: 409 GYTVSGVQGVLEMRYNAWRLQPVPGAAAPAFNAAANPRAGAPARHAQADVRVASFNVLNY 468

Query: 475 FNDVVGGDTNPSGGNRGALTEEEMLLQRTKIVSAITAMNADIVGLMEIANNGFGEKSAIK 534
           FN    G       NRGA T+ E   Q  KIV+AI A++AD+VGLMEI N+G+G  SAI+
Sbjct: 469 FNGDGKGAGFDDPANRGAKTQAEFERQEAKIVAAIRAIDADVVGLMEIENDGYGSLSAIR 528

Query: 535 NLVDALNEKQTTENAYSYIQIADTDKYDGKYFGSDAITVGMLYRAGKVSLAGAARTIETP 594
            L   L         + Y++            G DAITV ++Y    V   G   T+   
Sbjct: 529 RLTSQLGAD------WRYVEPGVPK------LGGDAITVAIIYNGRTVEPVGVPATLAID 576

Query: 595 EQHASVGSVTRIKDGKTETNPGNDAYQRHSLAQTFKI--HDQNLTVVVNHLKSKN-SGCL 651
           +++                        R  LA++F+     QN TVVVNHLKSK  SG  
Sbjct: 577 DKN------------------------RQPLARSFRRIGGTQNFTVVVNHLKSKGCSGAT 612

Query: 652 EDWVNFEESVDPADLQGRCNEFRVSAAKVLGEALKDVKGDL-----LVIGDMNAYGMEDP 706
                  +  D  D Q   N  RV AA ++ + L      +     L+IGD+N+Y  EDP
Sbjct: 613 G------KDADQGDGQSCWNSTRVRAAGLIADWLATSPTGVADIGKLLIGDLNSYAKEDP 666

Query: 707 LRVLTDFDASKSDRDIMTASWTTLNGKVYERQGSKIDKGYGLINLNTKAHGTGTYSYSYN 766
           + +L +                               KGY   ++  K  G   YSY Y 
Sbjct: 667 VVLLAN-------------------------------KGYA--DMVEKFVGKDAYSYVYG 693

Query: 767 GELGNLDHALANTSLAKRLVDIEDWHINSVESSLFEFGKKFSG----NLVKSENAFSASD 822
           GE G +DHALA + LA+R+  + +WHIN+ E    E+   +          + +A+ +SD
Sbjct: 694 GESGYIDHALATSGLAERVRAVHEWHINADEPIALEYSFAYKSAEQQQTFYAPDAYRSSD 753

Query: 823 HDPVIVALSYPAPVVPPKPQPT-PKDDGGALG------------YLGLALLSLLGLQRRR 869
           HDPV+V L+           P      GGA G             LGLAL +    Q RR
Sbjct: 754 HDPVLVDLALNTQNAGGGTSPEGDAATGGATGSAGAGGAGAVDPILGLALTAAAVAQARR 813

Query: 870 R 870
           R
Sbjct: 814 R 814