Pairwise Alignments

Query, 226 a.a., amino acid ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  127 bits (318), Expect = 3e-34
 Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 21/222 (9%)

Query: 24  ILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQLVIL 83
           IL GL +T+ +T   M++G VLG    +M M+    I   A  Y+   RGTPV+VQL+  
Sbjct: 66  ILWGLSLTVWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRGTPVLVQLIFW 125

Query: 84  YFI-------------------VLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDK 124
           Y +                   V     +  +TAA++  GLN GAY+SEIIR+G+ +VD 
Sbjct: 126 YNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVDP 185

Query: 125 GQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGE 184
           GQ +AA+SLG++   T+  I+LPQA+  I+P  GN+ I +LK ++++  I   DL+ + +
Sbjct: 186 GQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQ 245

Query: 185 IIRSRTFEDSVPLFTCALI-YLFLTYSFTFMLSKFEKRLKQS 225
            I SR F+ ++PL   A I YL  T   + +  + E+   +S
Sbjct: 246 TIYSRNFQ-TIPLLIVACIWYLAATTILSAVQVRIERHFARS 286