Pairwise Alignments

Query, 226 a.a., amino acid ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 222 a.a., cystine ABC transporter permease from Pantoea sp. MT58

 Score =  138 bits (347), Expect = 1e-37
 Identities = 71/204 (34%), Positives = 122/204 (59%), Gaps = 1/204 (0%)

Query: 24  ILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQLVIL 83
           +L G   TL ++   M  G +LG    LM++S  W +R+ A +YV + RGTP++ QL ++
Sbjct: 15  LLKGALFTLQLSIGGMFFGLLLGFILALMRLSRFWPVRWLARIYVSIFRGTPLIAQLFMI 74

Query: 84  YF-IVLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMK 142
           Y+ +    +++D I +A+I   LN+ AY SE +R  I ++++GQ EAA S+G+++  T++
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLNTAAYASESLRGAISSIERGQWEAAASIGMTRWQTLR 134

Query: 143 LIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCAL 202
            +ILPQA +  LP LGN FI L+K+T++   I   +L R  ++I SRT E        +L
Sbjct: 135 RVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASL 194

Query: 203 IYLFLTYSFTFMLSKFEKRLKQSD 226
           IY  +    + + ++ E+ + + D
Sbjct: 195 IYWVMATVLSALQNRLEQHVNRQD 218