Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (392), Expect = 2e-42
 Identities = 101/305 (33%), Positives = 164/305 (53%), Gaps = 27/305 (8%)

Query: 73  AAMTDRIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVM 132
           +++  ++V ELRLPR+L A V GA L++AG+ LQ +  N LA+P + G+S GAS   V++
Sbjct: 51  SSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVIL 110

Query: 133 LTLFSGSGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLN 192
           L  F             NS +   A  + G   F+L           +L+V+A     L 
Sbjct: 111 LLFFPS----------LNSPVAFMAAAVLGALLFTL-----------LLVVMARK---LR 146

Query: 193 SQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILPTIVVL 252
               R+LL GVA   + GA+ +   YF+       +++W +GS A  SW   +L  + V 
Sbjct: 147 LTTARLLLVGVALGILSGAVVTWAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVP 206

Query: 253 VSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGL 312
           V  +++L     +  L  G+  A  LG+++ ++R  ++L  +L+    VA  G IGFVGL
Sbjct: 207 VVIWLVL-QGGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGL 265

Query: 313 MIPHTVRLLFPGRQPIL--LTALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFL 370
           ++PH +RL       +L  L+AL G L +V  D++AR  LG+ ELP+G++T ++G+  F+
Sbjct: 266 VVPHLLRLTLGSENRLLLPLSALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFI 325

Query: 371 LILRR 375
            +L R
Sbjct: 326 WMLVR 330