Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 347 a.a., iron-compound ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  400 bits (1029), Expect = e-116
 Identities = 218/372 (58%), Positives = 274/372 (73%), Gaps = 29/372 (7%)

Query: 8   ITLLTPIFTPLTRQQWLMLALVGFTLLTPIAAASFGAANISFLDVFNVFIDKFSQLFMGE 67
           +T L  + TPL R++ ++LAL+   LL+P+ A+ FGA +ISF +  +V++       +GE
Sbjct: 1   MTALKAMLTPLGRRELMVLALILACLLSPVLASIFGAVDISFREAMSVYLHSL----IGE 56

Query: 68  NAPSTAAMTDRIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASF 127
                A +  RI++ELRLPRILLAFV GAGL+L+G  LQ VTRNPLADPYLFGIS+GAS 
Sbjct: 57  RPTDVAYLDSRILLELRLPRILLAFVCGAGLALSGWALQLVTRNPLADPYLFGISAGASL 116

Query: 128 GAVVMLTLFSGSGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALS 187
           GA+V+L+L                GI  G  +  GL     P GAFIGAS SVL+VL LS
Sbjct: 117 GAIVVLSL----------------GITHGVLLAIGL-----PLGAFIGASASVLVVLTLS 155

Query: 188 GLGLNSQVERMLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILP 247
           G GL SQVERMLLSGVATSF+FGAL SLLLYF+SPQ TASV+FWSLGSFA+A+W LL LP
Sbjct: 156 GFGLQSQVERMLLSGVATSFLFGALGSLLLYFSSPQVTASVIFWSLGSFARAAWDLLWLP 215

Query: 248 TIVV--LVSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCG 305
            +V    V+F +++  +RQ+ AL AGDETAH LGV+V KLR+  LL+CSL+TA+LVA+CG
Sbjct: 216 WLVFGGFVAFLLLV--RRQLFALSAGDETAHALGVSVAKLRIISLLMCSLMTAVLVASCG 273

Query: 306 GIGFVGLMIPHTVRLLFPGRQPILLTALVGGLFMVWIDVLARCLLGNQELPVGIITASIG 365
           GIGFVGLMIPH  RLLFPG Q +L+ A++GGLFMVW+DV+ R LL  QELPVG+ITA +G
Sbjct: 274 GIGFVGLMIPHIARLLFPGSQSLLIVAMLGGLFMVWVDVMTRSLLPPQELPVGVITAVVG 333

Query: 366 SFFFLLILRRRK 377
           S FFL++L  R+
Sbjct: 334 SVFFLMLLFGRR 345