Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 342 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  163 bits (413), Expect = 6e-45
 Identities = 115/342 (33%), Positives = 179/342 (52%), Gaps = 33/342 (9%)

Query: 38  AAASFGAANISFLDVFNVFIDKFSQLFMGENAPSTAAMTDRIVMELRLPRILLAFVAGAG 97
           A A+ G A I  + V  V  +K     +G    +   + + I+   R+ R L+A   GA 
Sbjct: 27  AGAALGEAPIPLVTVIEVVANKV----LGAGY-ALDPIDEGIIWNYRVARALVAASCGAS 81

Query: 98  LSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFSGSGFFANAGVIANSGIFSGA 157
           L+++G VLQ++  N LADPY+ GIS+GAS GAV +  L  G G                 
Sbjct: 82  LAVSGVVLQSLLLNALADPYILGISAGASSGAVAVAVLGLGGGLV--------------- 126

Query: 158 EILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLNSQVERMLLSGVATSFMFGALTSLLL 217
                    SL  GAF+GA L+  +V  ++ L        ++L+G+A S +F ALTS ++
Sbjct: 127 ---------SLSVGAFLGAVLAFALVSFIA-LKAGRGPAAIILAGIAGSQLFNALTSFVV 176

Query: 218 Y-FASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSFFIILGWKRQIMALQAGDETAH 276
              A+      ++FW LG+ +   W  + L   V L    I L + R + A   G ++A 
Sbjct: 177 TKVATADQARGIMFWLLGNLSGVRWPDVSLAVPVALGGLVICLFYARALDAFAFGADSAA 236

Query: 277 TLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRLLFPGRQPILL--TALV 334
           +LG+ V ++ + M+ + +  TA +V+  G IGFVGL+IPH  RL    R   +L   AL+
Sbjct: 237 SLGIPVRRVYIMMIAIAAGTTATMVSIVGSIGFVGLVIPHVARLTVGVRHNKVLPAAALI 296

Query: 335 GGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFLLILRRR 376
           G +FM+  D+L+R ++  Q LP+G++TA +G+  F LIL RR
Sbjct: 297 GAIFMIAADILSRKIIPGQVLPIGVMTALVGAPAFALILMRR 338