Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 348 a.a., transport system permease protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  236 bits (602), Expect = 7e-67
 Identities = 136/355 (38%), Positives = 208/355 (58%), Gaps = 28/355 (7%)

Query: 24  LMLALVGFTLLTPIAAASFGAANISFLDVFNVFIDKFSQLFMGENAPSTAAMTDRIVMEL 83
           L +A V   LL+   A S GA  +    V+ +  D+   +  G   P        IV E+
Sbjct: 19  LTVAGVAVLLLSISVAVSLGAVAVPLGTVWGIMADR---ILPGLLTPDWTTGQAAIVWEI 75

Query: 84  RLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFSGSGFFA 143
           RLPR LLA + GAGL+L G+ LQ+VTRNPLADP+L GISSGA+FGA++ L          
Sbjct: 76  RLPRALLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFGAILALL--------- 126

Query: 144 NAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLNSQVERMLLSGV 203
                 ++G+F G          ++P  AF GA  + L+VL ++     +  +R++L+GV
Sbjct: 127 ------HTGLFLGL--------LTVPLLAFAGALAATLLVLGVTSFAQATGADRLVLAGV 172

Query: 204 ATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSFFIILGWKR 263
           A SF+  +  ++L++   P+AT +V+FW LG    A W  L+ P ++++      L    
Sbjct: 173 AVSFIVMSCANILIFIGDPRATHTVVFWMLGGLGLAQWDQLLFPAVILVGCGLWFLANAS 232

Query: 264 QIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRLLFP 323
           ++ A+  GDETA TLG+ + + RL++ ++ +L+T  +VA  G IGFVGLMIPH VR+L  
Sbjct: 233 RLNAMTIGDETASTLGIPIARFRLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVG 292

Query: 324 GRQPILL--TALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFLLILRRR 376
           G    +L  +ALVG +F+VW D+ AR ++  +++P+GI+T  IG  FF+ +LRRR
Sbjct: 293 GDYARVLPASALVGAIFLVWADIAARTVMAPEDIPIGIVTGLIGGAFFVWLLRRR 347