Pairwise Alignments

Query, 380 a.a., iron-compound ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 338 a.a., transport system permease protein (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (476), Expect = 3e-52
 Identities = 122/367 (33%), Positives = 194/367 (52%), Gaps = 40/367 (10%)

Query: 18  LTRQQWLMLALVGFTLLTPIAAASFGAANISFLDVFNVFIDKFSQLFMGENAPSTAAMTD 77
           + + +WL   +    +L+ + + S G  NIS +D  +   +  ++  +G  AP       
Sbjct: 1   MLQHRWLWPTMATLLILSSLLSVSVGPVNISLIDSLSAVFNWATEQNIGNLAPHEQL--- 57

Query: 78  RIVMELRLPRILLAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFS 137
            +V  +RLPR LLA   GA L+  G+V+Q + RNPLADP + G+SSGA+ GA + +  F 
Sbjct: 58  -VVSNVRLPRTLLALAVGAMLAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVQFP 116

Query: 138 GSGFFANAGVIANSGIFSGAEILAGLQWFSLPFGAFIGASLSVLIVLALSGLGLNSQVER 197
                A + +I+ S   SG                     ++ LIV  L+   L + V  
Sbjct: 117 ----HAESVMISVSAFSSGL--------------------ITTLIVYRLASSALGTSVVL 152

Query: 198 MLLSGVATSFMFGALTSLLLYFASPQATASVLFWSLGSFAKASWSLLILPTIVVLVSFFI 257
           +LLSGVA + + GA   +L Y A+  A   +  W +GS A A W  + L  +V+      
Sbjct: 153 LLLSGVAVAALAGAGIGVLTYLANDMALRDLTLWQMGSIAGAQWQYVGLCLVVL-----A 207

Query: 258 ILGWK-----RQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGL 312
           +L W+     + + AL  G+  A  LG++V  L+L ++LLC+L   + VA  G IGF+GL
Sbjct: 208 LLSWQFNRDAKALNALLLGEAEARHLGIDVDSLKLRLILLCALGVGVSVAATGIIGFIGL 267

Query: 313 MIPHTVRLLF-PGRQPIL-LTALVGGLFMVWIDVLARCLLGNQELPVGIITASIGSFFFL 370
           ++PH VR+L  P  Q +L ++AL+G   +   D+ AR  L   ELPVG++TA IG+ FF+
Sbjct: 268 VVPHLVRMLLGPDHQRLLPMSALLGAALLALADIGARAFLPPAELPVGLVTALIGAPFFI 327

Query: 371 LILRRRK 377
            +L +++
Sbjct: 328 FLLLQQR 334