Pairwise Alignments

Query, 285 a.a., iron-compound ABC transporter, ATP-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 279 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 2e-45
 Identities = 89/251 (35%), Positives = 141/251 (56%), Gaps = 4/251 (1%)

Query: 3   LNVSQLSWTIEGKTILSGVNFALQRGEMLGLIGPNGAGKSSLLRCLYRFIRPTQGQISLF 62
           L   +LS   EGK++   ++ A+  G+   ++GPNG GKS+LL+ L R ++P  GQ+ L 
Sbjct: 21  LKTERLSLGYEGKSVCDALDLAIPHGKFSVIVGPNGCGKSTLLKSLCRLLKPLAGQVLLD 80

Query: 63  SQDISQLSPKAFACKVAVVQQDTPHYFDMTTEQLVAMGLTPHKGMFDSHSSGDSDKIIKA 122
            Q+I QL  K  A ++ ++ Q       +    LV+ G  PH+G+F   S  D   + +A
Sbjct: 81  GQNIHQLPTKVVAKQLGLLPQSALTPEGIKVVDLVSRGRYPHQGLFRQWSRVDERAVEEA 140

Query: 123 LEKVGLSHKLHQQYERLSGGEKQRALIARAIVQQPLLLILDEPTNHLDVRYQIQILELV- 181
           +    +        ++LSGG++QR  +A A+ QQ   L+LDEPT +LD+ +QI++L+L  
Sbjct: 141 MRATHVHELAQHSVDQLSGGQRQRVWVAMALAQQTPYLLLDEPTTYLDIAHQIELLDLFW 200

Query: 182 ---RSLGISVIASIHDLNLASALCDSLLLLDNGQVSAMGTPTEVLTEERIAQVFGVCAQV 238
              R  G +++A +HDLN A    D L++L  G++ A G P  ++T   + QVFG+   V
Sbjct: 201 RLNRQQGHTLVAVLHDLNQACRYADHLIVLQEGKIVAQGDPHSLVTPALVKQVFGIDCVV 260

Query: 239 MPHPQHANPLI 249
           MP P    PLI
Sbjct: 261 MPDPISCTPLI 271