Pairwise Alignments

Query, 1244 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1236 a.a., methionine synthase from Pseudomonas fluorescens FW300-N2C3

 Score = 1540 bits (3986), Expect = 0.0
 Identities = 782/1239 (63%), Positives = 958/1239 (77%), Gaps = 25/1239 (2%)

Query: 15   IRNQLSTRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNNDLLVLTQPHIIKQI 74
            ++  L  RILILDG MGTMIQ YKLEE DYRG+RF DW +DVKGNNDLLVL++P +I  I
Sbjct: 11   LQQALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLVLSRPDVIGAI 70

Query: 75   HTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLAREACDAIEQAT-GKPR 133
               YL AGADI+ETNTFNAT ++ ADY MQ L+ E+N EGARLAR+  DA    T  KPR
Sbjct: 71   EKAYLDAGADILETNTFNATQVSQADYGMQGLAYELNLEGARLARQVADAKTLETPDKPR 130

Query: 134  YVAGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGGADIIMVETIFDTL 193
            +VAGVLGPT+RTCS+SPDVN+PG+RN+ FDELV  Y E+T+ LIEGGAD+I++ETIFDTL
Sbjct: 131  FVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTL 190

Query: 194  NAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTEAFYNSLRHIKPLS 253
            NAKAA+FA++ V++EL        LP+MISGTITDASGRTL+GQTTEAF+NS+ H KP+S
Sbjct: 191  NAKAAIFAVQGVYEEL-----GVELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPIS 245

Query: 254  IGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEDMAKVIQEWAREG 313
            +GLNCALG  ELRPY+EELS  A  +VSAHPNAGLPNEFG YDE P + AKVI+E+A+ G
Sbjct: 246  VGLNCALGASELRPYLEELSNKASTHVSAHPNAGLPNEFGEYDELPAETAKVIEEFAQSG 305

Query: 314  MLNIIGGCCGSTPEHIKVIREAVEQFAPRVLPEIPVACRLAGLEPLTIDAQTLFVNVGER 373
             LNI+GGCCG+TP HI+ I +AV  +APR +PEIP ACRL+GLEP TID  +LFVNVGER
Sbjct: 306  FLNIVGGCCGTTPAHIEAIAKAVAGYAPRPIPEIPRACRLSGLEPFTIDRSSLFVNVGER 365

Query: 374  TNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDGVEIMHKFLNLIAS 433
            TN+TGSAKF +LI+E  + +AL+VA +QVE+GAQ+IDINMDEGMLD  + M  FLNLIA 
Sbjct: 366  TNITGSAKFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFLNLIAG 425

Query: 434  EPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQATLVKRYGAAAII 493
            EPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSIS+KEG E+FI  A L KRYGAA ++
Sbjct: 426  EPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVV 485

Query: 494  MAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIATGIDEHDNYAVDF 553
            MAFDE GQADT+ARK EIC R+Y +LV++VGFPPEDIIFDPNIFA+ATGI+EH+NYAVDF
Sbjct: 486  MAFDEAGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDF 545

Query: 554  IDAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIKVGMDMGIVNAGQL 613
            I+A   I+  LP+A+ SGGVSNVSFSFRGNNPVREAIH+VFL +AI+ G+ MGIVNAGQL
Sbjct: 546  INACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRAGLTMGIVNAGQL 605

Query: 614  AIFDDIDPELKVRVENVVLNLPCPVEGSNNTEQLLEIAEKFRGDGSSSAKKEDLEWRSWP 673
             I+D I  EL+  VE+V+LN          T+ LL IA+K++GDGS   + E  EWR W 
Sbjct: 606  EIYDQIPAELRDAVEDVILN-----RTPEGTDALLAIADKYKGDGSVK-EAETEEWRGWE 659

Query: 674  VNQRLAHALVKGITEFIDEDTEAARQAASRPLDVIEGPLMDGMNIVGDLFGSGKMFLPQV 733
            VN+RL HALVKGIT  I EDTE +R + +RP++VIEGPLM GMNIVGDLFG+GKMFLPQV
Sbjct: 660  VNKRLEHALVKGITTHIVEDTEESRLSFTRPIEVIEGPLMAGMNIVGDLFGAGKMFLPQV 719

Query: 734  VKSARVMKKAVAYLNPFIEKEK-VAGQSNGKILMVTVKSDVHDIGKNIVGVVLACNGFEV 792
            VKSARVMK+AVA+L PFIE EK    ++ GKILM TVK DVHDIGKNIVGVVL CNG+++
Sbjct: 720  VKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDI 779

Query: 793  FDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAIIGGATC 852
             DLGVMV  E+IL+  KE   DIIG+SGLITPSLDEMVH  +   R+   +P +IGGAT 
Sbjct: 780  VDLGVMVPAEKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATT 839

Query: 853  SKIHTAVKIAPHYPHGA-IYIADASRAVPMVSKLVNNETRQATIDETYAEYDDMRTKRLS 911
            SK HTAVKI P Y + A IY+ DASRAV + ++L++ E + A +++T  +Y ++R +  +
Sbjct: 840  SKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPAFVEKTRQDYIEVRERTAN 899

Query: 912  QAKRKEIVSLEAARENRCQHDWANYSPFKPNVLGRQVFDDYPLTDLVDRIDWTPFFRAWE 971
            ++ R E +S  AA   + Q DW++Y P KP   G +V D+  L  L + IDWTPFF +W+
Sbjct: 900  RSARTERLSYPAAVAKKPQFDWSSYQPVKPTFTGAKVLDNIDLNVLAEYIDWTPFFISWD 959

Query: 972  LHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGFDDIELY 1031
            L G YP IL+D+VVG  A  L++D +AML+K+I+EK ++A+ V G +PAN V  DD+E+Y
Sbjct: 960  LAGKYPRILTDEVVGEAATALYADARAMLRKLIDEKLISARAVFGFWPANQVHDDDLEVY 1019

Query: 1032 TDETRTEVELTTHHLRMQLERV-GNDNFCLADFVAPKDSGVADYMGGFAVTAGHGIDEHV 1090
             D+ +    L  HHLR Q+ +  G  NF LADFVAPKDSGV DY+GGF  TAG G +E  
Sbjct: 1020 GDDGKPLARL--HHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYVGGFITTAGIGAEEVA 1077

Query: 1091 ARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNEALIREKYKGI 1150
              ++   DDYN+IM+K LADRLAEA AE +H++VRKE WGYA DE LDNEALI+E+Y GI
Sbjct: 1078 KAYQEAGDDYNSIMVKALADRLAEACAEWLHQQVRKEHWGYARDESLDNEALIKEQYTGI 1137

Query: 1151 RPAPGYPACPDHTEKGLLWELLKPNETIDLN-------ITESYAMFPTAAVSGWYFAHPK 1203
            RPAPGYPACPDHTEK  L+ LL P E  +L        +TE YAMFP AAVSGWYFAHP+
Sbjct: 1138 RPAPGYPACPDHTEKATLFRLLDP-EASELKAGRSGVFLTEHYAMFPAAAVSGWYFAHPQ 1196

Query: 1204 SRYFGVSNIGRDQVEDYAKRKGMTVAETEKWLAPVLDYD 1242
            ++YF V  I +DQV+ Y  RKG  ++ TE+WLAP L YD
Sbjct: 1197 AQYFAVGKIDKDQVQSYTARKGQDLSVTERWLAPNLGYD 1235