Pairwise Alignments

Query, 1244 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 1610 bits (4169), Expect = 0.0
 Identities = 810/1230 (65%), Positives = 969/1230 (78%), Gaps = 17/1230 (1%)

Query: 15   IRNQLSTRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNNDLLVLTQPHIIKQI 74
            +  QL  RIL++DG MGTMIQ YKL+E DYRG RF DWH D+KGNNDLLVLTQP IIK+I
Sbjct: 9    LEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEI 68

Query: 75   HTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLAREACDA-IEQATGKPR 133
            H+ YL AGADI+ETNTFN+TTIAMADYDMQSLSAEIN   A+LARE  D    +   +PR
Sbjct: 69   HSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPR 128

Query: 134  YVAGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGGADIIMVETIFDTL 193
            YVAGVLGPTNRTCSISPDVNDPGFRN+ FD LV AY ESTRALI+GG+D+I++ETIFDTL
Sbjct: 129  YVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTL 188

Query: 194  NAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTEAFYNSLRHIKPLS 253
            NAKA  FA+++VF+EL        LPVMISGTITDASGRTL+GQTTEAFYN+LRH++P+S
Sbjct: 189  NAKACAFAVDSVFEEL-----GISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPIS 243

Query: 254  IGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEDMAKVIQEWAREG 313
             GLNCALGP ELR YVEELSRI+ECYVSAHPNAGLPN FG YD + E+MA+ I EWA+ G
Sbjct: 244  FGLNCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAG 303

Query: 314  MLNIIGGCCGSTPEHIKVIREAVEQFAPRVLPEIPVACRLAGLEPLTIDAQTLFVNVGER 373
             LN++GGCCG+TPEHI  I +AVE   PR LP++ V CRL+GLEPL I  +TLFVNVGER
Sbjct: 304  FLNLVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGER 363

Query: 374  TNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDGVEIMHKFLNLIAS 433
            TNVTGSA+F +LIKE ++++ALDVAREQVE+GAQIIDINMDEGMLD    M +FLNL AS
Sbjct: 364  TNVTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCAS 423

Query: 434  EPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQATLVKRYGAAAII 493
            EP+IS+VP+M+DSSKWEVIEAGLKCIQGKGIVNSISLKEG+EKFI QA LV+RYGAA I+
Sbjct: 424  EPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIV 483

Query: 494  MAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIATGIDEHDNYAVDF 553
            MAFDE GQADT+ RK+EIC RAY +LVD+VGFPPEDIIFDPNIFA+ATGIDEH+NYA+DF
Sbjct: 484  MAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDF 543

Query: 554  IDAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIKVGMDMGIVNAGQL 613
            I+A+ +IK  LPHAMISGGVSNVSFSFRGNN VREAIHAVFLYH  K GMDMGIVNAGQL
Sbjct: 544  INAVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQL 603

Query: 614  AIFDDIDPELKVRVENVVLNLPCPVEGSNNTEQLLEIAEKFRGDGSSSAKKED---LEWR 670
             I+D++  +L+  VE+V+LN       S+ TE+LLEIAE +R   +S  K+ED   LEWR
Sbjct: 604  EIYDNVPLKLREAVEDVILN-----RRSDGTERLLEIAEAYR--ENSVGKEEDASALEWR 656

Query: 671  SWPVNQRLAHALVKGITEFIDEDTEAARQAASRPLDVIEGPLMDGMNIVGDLFGSGKMFL 730
            +WPV +RL HALVKGITEFI +DTE ARQ AS+PL+VIEGPLMDGMN+VGDLFG GKMFL
Sbjct: 657  AWPVAKRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFL 716

Query: 731  PQVVKSARVMKKAVAYLNPFIEKEKVAGQSNGKILMVTVKSDVHDIGKNIVGVVLACNGF 790
            PQVVKSARVMK+AVAYL PFI  +K    SNGKIL+ TVK DVHDIGKNIVGVVL CN F
Sbjct: 717  PQVVKSARVMKQAVAYLEPFINAQKSGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNF 776

Query: 791  EVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAIIGGA 850
            E+ DLGVMV  E+IL+  +E N+DIIG+SGLITPSLDEMVH  K   R+G  +P +IGGA
Sbjct: 777  EIIDLGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGA 836

Query: 851  TCSKIHTAVKIAPHYPHGAIYIADASRAVPMVSKLVNNETRQATIDETYAEYDDMRTKRL 910
            T SK HTAVKI  +Y    +Y+ +ASRAV + + L+++E R   I+    +Y+  R +  
Sbjct: 837  TTSKAHTAVKIEQNYHAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHA 896

Query: 911  SQAKRKEIVSLEAARENRCQHDWANYSPFKPNVLGRQVFDDYPLTDLVDRIDWTPFFRAW 970
             +  +   V+LE AR N+   DWANY+P  P   G  VF++  L  L   IDWTPFF  W
Sbjct: 897  RKTPKSRPVTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTW 956

Query: 971  ELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGFDDIEL 1030
             L G YP IL  + VG EA++LF D  A+L K+  E  L A G+  LFPA +VG DDIE+
Sbjct: 957  SLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVG-DDIEV 1015

Query: 1031 YTDETRTEVELTTHHLRMQLERVGNDNFCLADFVAPKDSGVADYMGGFAVTAGHGIDEHV 1090
            Y+DE+RT+V    ++LR Q E+    N+CL+D+VAPK+SG  D++G FAVT G G     
Sbjct: 1016 YSDESRTQVAHVLYNLRQQTEKPKGANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALA 1075

Query: 1091 ARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNEALIREKYKGI 1150
              ++A  DDYNAIM++ +ADRLAEAFAE +HE+VRKE WGYA+DE L N+ LIRE+Y+GI
Sbjct: 1076 DAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGI 1135

Query: 1151 RPAPGYPACPDHTEKGLLWELLKPNETIDLNITESYAMFPTAAVSGWYFAHPKSRYFGVS 1210
            RPAPGYPACP+HTEK  LW++L   ETI +++T SYAM+P A+VSGWYF+HP SRYF V+
Sbjct: 1136 RPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVA 1195

Query: 1211 NIGRDQVEDYAKRKGMTVAETEKWLAPVLD 1240
             I  DQ+  YA+RKG  + E EKWLAP LD
Sbjct: 1196 QIQPDQLHSYAERKGWRLEEAEKWLAPNLD 1225