Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase I, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 184 a.a., NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  150 bits (380), Expect = 1e-41
 Identities = 73/158 (46%), Positives = 104/158 (65%), Gaps = 3/158 (1%)

Query: 25  VDDPLAQEATRGIM-MGRLEEVLKDTVNWGRKNSLWPYNFGISCCYVEMCTAFTSPHDVA 83
           V+D L  E    ++  G +   +   +NW R  S+WP  FG++CC VEM  A  +  D+ 
Sbjct: 20  VEDILRPEGENPLLEKGYVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLD 79

Query: 84  RFGAEVIRASPRQADFMVIAGTPFIKMAPVIQRLYEQLLEPKWVISMGACANSGGMYDI- 142
           R+G  V R SPRQ+D M++AGT   KMAP ++++Y+Q+ +PKWVISMG+CAN GG Y   
Sbjct: 80  RYGV-VFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYS 138

Query: 143 YSVVQGVDKFLPVDVYIPGCPPRPEAFLQALMLLQDSI 180
           YSVV+G D+ +PVD+Y+PGCPP  EA +  ++ LQ  I
Sbjct: 139 YSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKI 176