Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase I, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 198 a.a., NADH-quinone oxidoreductase subunit B from Rhodopseudomonas palustris CGA009

 Score =  143 bits (360), Expect = 3e-39
 Identities = 73/157 (46%), Positives = 97/157 (61%), Gaps = 3/157 (1%)

Query: 26  DDPLAQEATRGIM-MGRLEEVLKDTVNWGRKNSLWPYNFGISCCYVEMCTAFTSPHDVAR 84
           DDP      R +   G       D + W R  SL    FG++CC VEM       +D  R
Sbjct: 35  DDPFFLNVNRELSDKGFFVAATDDLITWARTGSLMWMTFGLACCAVEMMQLSMPRYDAER 94

Query: 85  FGAEVIRASPRQADFMVIAGTPFIKMAPVIQRLYEQLLEPKWVISMGACANSGGMYDI-Y 143
           FG    RASPRQ+D M++AGT   KMAP ++++Y+Q+ EP++VISMG+CAN GG Y   Y
Sbjct: 95  FGFAP-RASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSY 153

Query: 144 SVVQGVDKFLPVDVYIPGCPPRPEAFLQALMLLQDSI 180
           SVV+G D+ +P+D+Y+PGCPP  EA L  +MLLQ  I
Sbjct: 154 SVVRGCDRIVPIDIYVPGCPPTAEALLYGVMLLQKKI 190