Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase I, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 187 a.a., NADH-quinone oxidoreductase, B subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  150 bits (378), Expect = 2e-41
 Identities = 69/134 (51%), Positives = 94/134 (70%), Gaps = 3/134 (2%)

Query: 54  RKNSLWPYNFGISCCYVEMCTAFTSPHDVARFGAEVIRASPRQADFMVIAGTPFIKMAPV 113
           R  SLWP  FG++CC +EM     +  D++RFGAEV R SPRQ+D M++AGT   KMAP 
Sbjct: 38  RAMSLWPMTFGLACCAIEMMAVGMARFDISRFGAEVFRPSPRQSDLMIVAGTVTRKMAPA 97

Query: 114 IQRLYEQLLEPKWVISMGACANSGGMYDI---YSVVQGVDKFLPVDVYIPGCPPRPEAFL 170
           + RLYEQ+  P++V+++G CA SGG ++    Y++V+GVD  +PVDVY+PGCPPRPEA L
Sbjct: 98  LVRLYEQMPAPRYVMALGNCAISGGPFNFEGQYAIVEGVDNLVPVDVYVPGCPPRPEALL 157

Query: 171 QALMLLQDSIGKER 184
           + L  +Q  I   R
Sbjct: 158 EGLFQIQHKITGRR 171