Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase I, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 157 a.a., NADH ubiquinone oxidoreductase 20 kDa subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  103 bits (257), Expect = 2e-27
 Identities = 53/140 (37%), Positives = 88/140 (62%), Gaps = 5/140 (3%)

Query: 45  VLKDTVNWGRKNSLWPYNFGI-SC--CYVEMCTAFTSPHDVARFGAEVIRASPRQADFMV 101
           +L++ +N GR  S W  +F   SC  C +E+    T   DV RFG   +  +P+ AD ++
Sbjct: 3   LLENWINKGRLKSPWVVHFDCGSCNGCDIEVLACLTPVFDVERFGIINV-GNPKHADVLL 61

Query: 102 IAGTPFIKMAPVIQRLYEQLLEPKWVISMGACANSGGMY-DIYSVVQGVDKFLPVDVYIP 160
           + GT   +   V++ +Y+Q+ +PK VI++GAC  SGG++ + Y+VV GVD+ +PVDVY+P
Sbjct: 62  VTGTVNHRNKKVLKNIYDQMPDPKAVIAIGACGTSGGVFRECYNVVGGVDQVIPVDVYVP 121

Query: 161 GCPPRPEAFLQALMLLQDSI 180
           GCP +P+A +  ++   D +
Sbjct: 122 GCPAKPDAIIDGVVTALDVV 141