Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase I, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 158 a.a., NADH dehydrogenase subunit B from Herbaspirillum seropedicae SmR1

 Score =  157 bits (397), Expect = 1e-43
 Identities = 74/136 (54%), Positives = 97/136 (71%), Gaps = 2/136 (1%)

Query: 46  LKDTVNWGRKNSLWPYNFGISCCYVEMCTAFTSPHDVARFGAEVIRASPRQADFMVIAGT 105
           L   +NW R  SLWP  FG++CC VEM     S +D+ RFGA V R SPRQ+D M++AGT
Sbjct: 16  LDKVINWTRTGSLWPMTFGLACCAVEMMHVGASRYDLDRFGA-VFRPSPRQSDLMIVAGT 74

Query: 106 PFIKMAPVIQRLYEQLLEPKWVISMGACANSGGMYDI-YSVVQGVDKFLPVDVYIPGCPP 164
              KMAP ++++Y+Q+ EP+WVISMG+CAN GG Y   YSVV+G D+ +PVDVY+PGCPP
Sbjct: 75  LCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPP 134

Query: 165 RPEAFLQALMLLQDSI 180
             EA L  ++ LQ+ I
Sbjct: 135 TAEALLYGVIQLQNKI 150