Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 319 a.a., NADH-quinone oxidoreductase subunit NuoH from Rhodopseudomonas palustris CGA009

 Score =  342 bits (878), Expect = 5e-99
 Identities = 163/302 (53%), Positives = 223/302 (73%), Gaps = 1/302 (0%)

Query: 17  IVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFKEDWIPPFAD 76
           +++V +V AG F +++ERRLL   Q+R+GPNRVGPFG  Q +AD +K+  KED  PP AD
Sbjct: 14  LIMVLLVLAGTF-TWVERRLLGFVQERYGPNRVGPFGSLQWVADTVKILTKEDRPPPGAD 72

Query: 77  RRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAVLFAGWSSNN 136
           + ++ILAP +A T  +  F VV I   W ++ ++VGLL++L + GL  YA +   W+SNN
Sbjct: 73  KLLYILAPAVAATPVLAGFGVVAIGDGWALSSVDVGLLFLLGMLGLTAYAAVLGAWASNN 132

Query: 137 KYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQAGLWNVVPQFLGFITF 196
           ++SLLG +RA+AQ L+YEVFLGLSLMG+V+  GSF++ +IVEAQ G+W VV Q LG   F
Sbjct: 133 RFSLLGGMRAAAQMLAYEVFLGLSLMGVVMIAGSFSMAEIVEAQRGVWFVVLQPLGMALF 192

Query: 197 LFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVGEYIGIVLISSLIVTLFFGG 256
             AG+A  HR PFD PE+E +L  G+  EY GM +GLFF+GEY+ ++L+S+L VTLFFGG
Sbjct: 193 TIAGIAAAHRLPFDLPESENDLIAGFITEYTGMSFGLFFLGEYLAVLLVSALAVTLFFGG 252

Query: 257 WHGPWLPPFFWFALKTACFMVFFILLRASLPRPRFDQVMSFGWKVCLPLTLINMLITAAV 316
           W GPWLP   WF LKTA   V F+ +RA+LPRPR+DQ++SF WKV LPL+L+N+++T  V
Sbjct: 253 WLGPWLPGPVWFGLKTAVIAVAFVWIRATLPRPRYDQLLSFAWKVALPLSLLNLMLTGIV 312

Query: 317 VL 318
           V+
Sbjct: 313 VV 314