Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 341 a.a., NADH-quinone oxidoreductase subunit NuoH from Rhodopseudomonas palustris CGA009

 Score =  268 bits (685), Expect = 1e-76
 Identities = 137/326 (42%), Positives = 210/326 (64%), Gaps = 12/326 (3%)

Query: 4   SLTELLLEIGKALIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIK 63
           +L  LL+ IG+++++LV ++ A A++   +R++ A  Q R GPN VGP+GL Q  AD++K
Sbjct: 8   NLWPLLVVIGQSVLLLVILLIAIAYILLADRKIWAAVQIRRGPNVVGPWGLLQSFADLLK 67

Query: 64  MFFKEDWIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLA 123
              KE  IP  A++ +F+LAP++     + A+AV+P+   W +AD+NVG+LYILA++ L+
Sbjct: 68  FVLKEPTIPDGANKGLFLLAPLVTCVLALAAWAVIPVNAGWVIADINVGVLYILAVSSLS 127

Query: 124 VYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQAGL 183
           VY ++ AGWSSN+KY  L +LR++AQ +SYEV +G  ++ +++  GS NL  IVEAQ G 
Sbjct: 128 VYGIIMAGWSSNSKYPFLAALRSAAQMVSYEVSIGFVVICVLLCVGSLNLTAIVEAQDGK 187

Query: 184 WNV-----VPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVGE 238
           W +     +P F  F+ F  + +A T+R PFD  EAE EL  G+ +EY+   + LF +GE
Sbjct: 188 WGMLGWYWLPLFPMFVVFYVSALAETNRPPFDLVEAESELVAGFMVEYSSTPYLLFMLGE 247

Query: 239 YIGIVLISSLIVTLFFGGWHGP-------WLPPFFWFALKTACFMVFFILLRASLPRPRF 291
           Y+ IV + ++   LF GGW  P       W+P   WF+LK       F + +A +PR R+
Sbjct: 248 YVAIVTMCAMGTILFLGGWLPPVPYAPFTWVPGIVWFSLKLLFMFFLFAMAKAIVPRYRY 307

Query: 292 DQVMSFGWKVCLPLTLINMLITAAVV 317
           DQ+M  GWKV LPL+L  ++I A+V+
Sbjct: 308 DQLMRLGWKVFLPLSLAMVVIVASVL 333