Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 350 a.a., NADH:ubiquinone oxidoreductase subunit 1 (chain H) from Dechlorosoma suillum PS

 Score =  256 bits (655), Expect = 4e-73
 Identities = 130/309 (42%), Positives = 202/309 (65%), Gaps = 14/309 (4%)

Query: 14  KALIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFKEDWIPP 73
           K + V+  ++   A++++ ER+++A    R GPNRVGP GL Q +AD +K+  KE  +P 
Sbjct: 25  KIVAVVAPLLLGVAYLTYFERKVIAYMHVRIGPNRVGPLGLIQPIADGLKLLLKEIIVPS 84

Query: 74  FADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAVLFAGWS 133
            AD+ ++++AP +A    + A+AVVP     GVA+++  LLYI+AIA + VY ++ AGW+
Sbjct: 85  GADKWVYLIAPGLAIAPALAAWAVVPFADGLGVANIDASLLYIMAIASMGVYGIILAGWA 144

Query: 134 SNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQ-----AGL----- 183
           SN+KY+ LG++R++AQ +SYE+ +G +L+ +++ + S NL +IV AQ     AG+     
Sbjct: 145 SNSKYAFLGAMRSAAQMVSYEISMGFALVTVLMVSNSLNLTEIVRAQDHGIFAGMGLTFL 204

Query: 184 -WNVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVGEYIGI 242
            WN +P    FI +L +GVA T+R PFD  E E E+  G+ +EY+GM + LFF+ EY  +
Sbjct: 205 SWNWLPLLPMFIVYLVSGVAETNRAPFDVVEGESEIVAGHMVEYSGMAFALFFLAEYANM 264

Query: 243 VLISSLIVTLFFGGWHGP--WLPP-FFWFALKTACFMVFFILLRASLPRPRFDQVMSFGW 299
           +LI++L   LF GGW  P  +LP  FFW A K +  +  F+  RA+ PR RFDQ+M  GW
Sbjct: 265 ILIAALTSLLFLGGWLSPVGFLPDGFFWLAAKMSFVLFLFLWFRATFPRYRFDQIMRLGW 324

Query: 300 KVCLPLTLI 308
           KV +P++L+
Sbjct: 325 KVFIPVSLV 333