Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 410 a.a., Probable NADH dehydrogenase I (chain H) NuoH (NADH-ubiquinone oxidoreductase chain H) from Mycobacterium tuberculosis H37Rv

 Score =  242 bits (618), Expect = 1e-68
 Identities = 127/327 (38%), Positives = 184/327 (56%), Gaps = 20/327 (6%)

Query: 10  LEIGKALIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFKED 69
           L   KA+ V V ++         ER+LL   Q R GPNRVGP G  Q LAD IK+  KE 
Sbjct: 11  LVAAKAIAVFVFLMLTVLVAILAERKLLGRMQLRPGPNRVGPKGALQSLADGIKLALKES 70

Query: 70  WIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGV---------ADLNVGLLYILAIA 120
             P   DR ++ +APII+      AFA +P  P   V          DL V +L+IL ++
Sbjct: 71  ITPGGIDRFVYFVAPIISVIPAFTAFAFIPFGPEVSVFGHRTPLQITDLPVAVLFILGLS 130

Query: 121 GLAVYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQ 180
            + VY ++  GW+S + Y LLG +R++AQ +SYEV +GLS   + +  G+ +   IV AQ
Sbjct: 131 AIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFATVFLMAGTMSTSQIVAAQ 190

Query: 181 AGLWNVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVGEYI 240
            G+W        F+ +L + V  T+R PFD PEAE EL  G+H EY+ +K+ +F + EY+
Sbjct: 191 DGVWYAFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYV 250

Query: 241 GIVLISSLIVTLFFGGWHGPW-----------LPPFFWFALKTACFMVFFILLRASLPRP 289
            +  +S+L  TLFFGGWH PW             P  WF  K   F+  +  LRA+LPR 
Sbjct: 251 NMTTVSALAATLFFGGWHAPWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLRATLPRL 310

Query: 290 RFDQVMSFGWKVCLPLTLINMLITAAV 316
           R+DQ M+ GWK+ +P++L+ +++ A +
Sbjct: 311 RYDQFMALGWKLLIPVSLVWVMVAAII 337