Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., NADH dehydrogenase (quinone) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  246 bits (627), Expect = 7e-70
 Identities = 129/313 (41%), Positives = 191/313 (61%), Gaps = 4/313 (1%)

Query: 9   LLEIGKALIVLVGIVGA-GAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFK 67
           +L +  AL+ +   VG  G  + + ER++    Q R GP  VGP G+ Q +AD +K+  K
Sbjct: 10  VLHVVLALVGVAVFVGLNGLLLVYAERKVAGFIQRRPGPYEVGPQGILQAVADALKLIGK 69

Query: 68  EDWIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAV 127
           +   P  AD  +F +AP++AF   +L F  +P +P     D+N+GLL ILA AG  V A+
Sbjct: 70  QLVRPDRADPLLFWMAPVLAFFPVLLLFLPIPFSPLLTGWDVNLGLLLILAFAGFNVLAL 129

Query: 128 LFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQAGL---W 184
           L AGW SNNKY LLG+ RA AQ+++YE+ L L+++ I  Q G+ +L  IV  Q G+   W
Sbjct: 130 LLAGWGSNNKYGLLGAARAVAQSVAYEIPLLLAVLAIAFQEGTLSLTAIVGGQGGMPWQW 189

Query: 185 NVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVGEYIGIVL 244
           N+  Q L F+ F  + +  T+R PFD PEAE EL  G+H EY+GM +G+FF+ EY  +++
Sbjct: 190 NIAVQPLAFLIFFVSALGETNRAPFDLPEAESELTAGFHTEYSGMGFGMFFLAEYANMIV 249

Query: 245 ISSLIVTLFFGGWHGPWLPPFFWFALKTACFMVFFILLRASLPRPRFDQVMSFGWKVCLP 304
             S+   LF GGW GP+L   +WF  K    ++  +  R + PR RFDQ+++  W+  LP
Sbjct: 250 ACSVCTVLFLGGWKGPFLDGAWWFLAKVYGLLLSMMWFRWTYPRVRFDQLLNLNWRWLLP 309

Query: 305 LTLINMLITAAVV 317
           L ++N+L TA V+
Sbjct: 310 LGVLNLLATAFVM 322