Pairwise Alignments

Query, 322 a.a., NADH dehydrogenase I, H subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 345 a.a., NADH dehydrogenase (quinone) (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  254 bits (648), Expect = 3e-72
 Identities = 135/314 (42%), Positives = 194/314 (61%), Gaps = 8/314 (2%)

Query: 9   LLEIGKALIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFKE 68
           +L I + L VL  ++ +  F+ + +R++ A  Q R GPN VG FGL Q +AD +K   KE
Sbjct: 13  VLIIAQCLAVLGFVMVSLLFLVYGDRKIWAAVQMRRGPNVVGAFGLLQTVADALKYVVKE 72

Query: 69  DWIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAVL 128
             +P  AD+ +F+LAP+ +F   ++A+AV+P    W +AD+NV +LY+ A++ L VY V+
Sbjct: 73  VVVPAGADKPVFMLAPMTSFVLAMIAWAVIPFNDGWVLADINVAILYVFAVSSLEVYGVI 132

Query: 129 FAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQTGSFNLRDIVEAQAG-----L 183
             GW+SN+KY  LGSLR++AQ +SYEV +GL ++G+++ TGS N   IV AQ G      
Sbjct: 133 MGGWASNSKYPFLGSLRSAAQMISYEVSIGLIIIGVILSTGSMNFSAIVAAQDGDFGFFS 192

Query: 184 WNVVPQFLGFITFLFAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGLFFVGEYIGIV 243
           W  +P       F  + +A T+R PFD PEAE EL  GY +EY+   + LF  GEYI I 
Sbjct: 193 WYWLPHLPMVFLFFISALAETNRPPFDLPEAESELVAGYQVEYSSTPFLLFMAGEYIAIF 252

Query: 244 LISSLIVTLFFGGWHG--PWLPPF-FWFALKTACFMVFFILLRASLPRPRFDQVMSFGWK 300
           L+ +LI  LFFGGW    P+LP    W   K A F   F +++A +PR R+DQ+M  GWK
Sbjct: 253 LMCALITLLFFGGWLSPIPFLPDGPIWMVGKMAFFFFLFAMVKAIVPRYRYDQLMRLGWK 312

Query: 301 VCLPLTLINMLITA 314
           V LP +L  ++  A
Sbjct: 313 VFLPFSLAWVVFVA 326