Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 2/165 (1%)

Query: 7   LATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTEAGAILY 66
           L  FV LV    FT  + +LF+TQP +S+ I+ LE+++   LL R+G+RF LTEAG I+Y
Sbjct: 6   LRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEAGEIVY 65

Query: 67  QHARQYQLAETELLARL-QTDNTYVGECRFGCSGAIASLLYPHFLERQIQYPELCVKIEA 125
           Q A+Q      +L A L   +  + G  R G    +  +    F + +  YP + + +  
Sbjct: 66  QRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVYARLFRQYRQTYPNVELTVVE 125

Query: 126 APNQRIVSGILTNQLDMGI-VTKRGEEADLTYQALGYAELSLVLP 169
              ++I   IL   +D+ + +    +  DL   AL +  +  V+P
Sbjct: 126 YGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVP 170