Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 2/170 (1%)

Query: 1   MLNQQWLATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTE 60
           M+  + L  FVT+ E   FT  A +L + QP +S  IKK E+Q+GV L  R  ++  LT 
Sbjct: 7   MMEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTH 66

Query: 61  AGAILYQHARQ-YQLAETELLARLQTDNTYVGECRFGCSGAIASLLYPHFLER-QIQYPE 118
            G +L +HA++  Q      LA  +      GE R G    + S  +P  +   +  +P 
Sbjct: 67  EGEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPN 126

Query: 119 LCVKIEAAPNQRIVSGILTNQLDMGIVTKRGEEADLTYQALGYAELSLVL 168
           L + +  A  Q I   +L+ +LD+G++       DL    L  +++  V+
Sbjct: 127 LKMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVV 176