Pairwise Alignments

Query, 310 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 289 a.a., transcriptional regulator, LysR family protein from Marinobacter adhaerens HP15

 Score =  199 bits (507), Expect = 5e-56
 Identities = 121/306 (39%), Positives = 166/306 (54%), Gaps = 19/306 (6%)

Query: 1   MLNQQWLATFVTLVEVGHFTHTANKLFMTQPGVSQHIKKLEEQVGVHLLLRKGKRFELTE 60
           M+N  WL TF TLVEVGHFT TA +L MTQ GVSQH++KLEEQ+G  LL+R+GK+F L+ 
Sbjct: 1   MINTTWLRTFCTLVEVGHFTRTAERLHMTQSGVSQHVRKLEEQLGAELLVRQGKQFSLSG 60

Query: 61  AGAILYQHARQYQLAETELLARLQTDNTYVGECRFGCSGAIASLLYPHFLERQIQYPELC 120
           AG  LY  A+    A + L   +  D  + G  R    G++   LYPH L  Q ++P+L 
Sbjct: 61  AGERLYTEAQGILFALSNLEQTVGEDPPFQGSVRIMSPGSVGLKLYPHLLALQSKHPKLI 120

Query: 121 VKIEAAPNQRIVSGILTNQLDMGIVTKRGEEADLTYQALGYAELSLVLPSQYLVDKIGIE 180
           +    APN  + + I  + +D+G +T R   AD++   +    L LV P+   V + G +
Sbjct: 121 MDYRFAPNPDVETAIAGSAVDLGFMTSRSTLADVSCTPVAQESLLLVTPA--TVQEPGWD 178

Query: 181 LLEQIGFIDHPDGDYYLQQVLQANFGGRAPMVNSRTGSPVKAHTMAFTHHIRRTGYVNQL 240
            L  +GFIDHPDG ++   +L AN+             P   H+  F     + G+ NQ+
Sbjct: 179 TLMNLGFIDHPDGSHHASLLLGANY-------------PEFQHSNLFP----KKGFSNQI 221

Query: 241 SQILLPVAKGLGFTVLPLSTVNAFMPRESLWAVDLEQKVQESLYLVHKSTRPLPSRFDAF 300
             IL PV+ GLGFTVLP   V AF  RE + A  L   V E+LYL     R L +R    
Sbjct: 222 GLILEPVSMGLGFTVLPAHAVEAFEKREHIRAHRLANPVSETLYLCVPRHRALAARMRTI 281

Query: 301 IEMAAR 306
           I  A +
Sbjct: 282 IAEAKK 287